Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 SLC7A5P2-201ENST00000553010 536 ntBASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
MRPS28Q9Y2Q9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 RNF165-205ENST00000588679 2904 ntBASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 AC104187.1-201ENST00000607510 612 ntBASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPS28Q9Y2Q9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MRPS28Q9Y2Q9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.39■□□□□ 0.38
MRPS28Q9Y2Q9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.39■□□□□ 0.38
MRPS28Q9Y2Q9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 AC027612.3-201ENST00000413684 1047 ntBASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 AP001160.3-201ENST00000601484 763 ntBASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 AL139246.5-201ENST00000606645 996 ntBASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MRPS28Q9Y2Q9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 LINC02228-203ENST00000641970 1355 ntBASIC17.38■□□□□ 0.37
MRPS28Q9Y2Q9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.37■□□□□ 0.37
MRPS28Q9Y2Q9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms