Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 AC092118.2-201ENST00000613495 667 ntBASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPH3AQ9Y2J0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 DUSP5P2-201ENST00000426873 1033 ntBASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 FAM201B-201ENST00000458407 597 ntBASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 AL589743.5-201ENST00000616611 1050 ntBASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 AC006128.1-201ENST00000624704 1661 ntBASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPH3AQ9Y2J0 AC027702.1-201ENST00000563810 1770 ntBASIC18.52■□□□□ 0.55
RPH3AQ9Y2J0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.52■□□□□ 0.55
RPH3AQ9Y2J0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPH3AQ9Y2J0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
RPH3AQ9Y2J0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPH3AQ9Y2J0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.51■□□□□ 0.55
RPH3AQ9Y2J0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AC087633.2-202ENST00000565166 1439 ntBASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AC008687.6-201ENST00000596318 630 ntBASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AIRN-201ENST00000601203 4374 ntBASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 FP700111.2-201ENST00000619190 1892 ntBASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPH3AQ9Y2J0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 PGM5P4-201ENST00000421970 445 ntBASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.49■□□□□ 0.55
RPH3AQ9Y2J0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms