Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 AC105020.6-201ENST00000621523 1217 ntBASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4E1Q9UPM8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 AC006970.2-201ENST00000450065 779 ntBASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 AF201337.1-201ENST00000520239 748 ntBASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.04■□□□□ 0.96
AP4E1Q9UPM8 AC073130.3-201ENST00000624389 2278 ntBASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 AL162377.1-201ENST00000618844 1793 ntBASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 AC105036.2-201ENST00000569468 176 ntBASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP4E1Q9UPM8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 SMG8-203ENST00000578922 2178 ntBASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4E1Q9UPM8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP4E1Q9UPM8 DPP3P2-201ENST00000416030 1696 ntBASIC21.02■□□□□ 0.95
AP4E1Q9UPM8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.02■□□□□ 0.95
AP4E1Q9UPM8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
AP4E1Q9UPM8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4E1Q9UPM8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
AP4E1Q9UPM8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP4E1Q9UPM8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
AP4E1Q9UPM8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21■□□□□ 0.95
AP4E1Q9UPM8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21■□□□□ 0.95
AP4E1Q9UPM8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP4E1Q9UPM8 KRT17P1-201ENST00000399211 1546 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms