Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RPH3ALQ9UNE2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
RPH3ALQ9UNE2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RPH3ALQ9UNE2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 AC136469.2-201ENST00000623944 1028 ntBASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RPH3ALQ9UNE2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 AL138724.1-201ENST00000606771 1088 ntBASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RPH3ALQ9UNE2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms