Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.85■□□□□ 0.93
PHTF1Q9UMS5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 AC006970.2-201ENST00000450065 779 ntBASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 CDV3P1-201ENST00000471403 739 ntBASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PHTF1Q9UMS5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 MIR663A-201ENST00000385250 93 ntBASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.83■□□□□ 0.93
PHTF1Q9UMS5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHTF1Q9UMS5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHTF1Q9UMS5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 CYP2T1P-201ENST00000432607 1285 ntBASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHTF1Q9UMS5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC116050.2-201ENST00000612102 1779 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC007322.3-201ENST00000426526 701 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC069236.1-201ENST00000604339 616 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 FAM21FP-204ENST00000608637 956 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AL050303.2-201ENST00000619798 666 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 AC008694.1-202ENST00000636953 945 ntBASIC20.8■□□□□ 0.92
PHTF1Q9UMS5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms