Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EBF1Q9UH73 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EBF1Q9UH73 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.66■□□□□ 0.9
EBF1Q9UH73 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EBF1Q9UH73 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EBF1Q9UH73 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EBF1Q9UH73 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EBF1Q9UH73 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
EBF1Q9UH73 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EBF1Q9UH73 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EBF1Q9UH73 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 BX088651.1-201ENST00000540551 451 ntBASIC20.65■□□□□ 0.9
EBF1Q9UH73 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.65■□□□□ 0.9
EBF1Q9UH73 AP001412.1-201ENST00000608405 714 ntBASIC20.65■□□□□ 0.9
EBF1Q9UH73 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF1Q9UH73 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
EBF1Q9UH73 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.64■□□□□ 0.9
EBF1Q9UH73 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
EBF1Q9UH73 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 MIR1224-201ENST00000408193 85 ntBASIC20.64■□□□□ 0.89
EBF1Q9UH73 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 AC124016.1-201ENST00000609552 612 ntBASIC20.64■□□□□ 0.89
EBF1Q9UH73 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
EBF1Q9UH73 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF1Q9UH73 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 AL135905.2-201ENST00000584934 1404 ntBASIC20.63■□□□□ 0.89
EBF1Q9UH73 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.63■□□□□ 0.89
EBF1Q9UH73 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.63■□□□□ 0.89
EBF1Q9UH73 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EBF1Q9UH73 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
EBF1Q9UH73 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 AC120498.8-201ENST00000614275 531 ntBASIC20.63■□□□□ 0.89
EBF1Q9UH73 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.63■□□□□ 0.89
EBF1Q9UH73 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF1Q9UH73 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.62■□□□□ 0.89
EBF1Q9UH73 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF1Q9UH73 AC087633.2-202ENST00000565166 1439 ntBASIC20.61■□□□□ 0.89
EBF1Q9UH73 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 FBXW4P1-201ENST00000426721 2239 ntBASIC20.61■□□□□ 0.89
EBF1Q9UH73 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EBF1Q9UH73 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF1Q9UH73 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms