Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 AC010980.2-201ENST00000587099 1412 ntBASIC18.92■□□□□ 0.62
CNIH4Q9P003 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 AC093787.1-201ENST00000450396 207 ntBASIC18.92■□□□□ 0.62
CNIH4Q9P003 MIR4758-201ENST00000577688 71 ntBASIC18.92■□□□□ 0.62
CNIH4Q9P003 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.92■□□□□ 0.62
CNIH4Q9P003 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNIH4Q9P003 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 AC007225.1-201ENST00000566331 1836 ntBASIC18.91■□□□□ 0.62
CNIH4Q9P003 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 AC073210.2-201ENST00000430369 194 ntBASIC18.91■□□□□ 0.62
CNIH4Q9P003 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNIH4Q9P003 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.91■□□□□ 0.62
CNIH4Q9P003 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 MIPEPP3-201ENST00000412105 444 ntBASIC18.9■□□□□ 0.62
CNIH4Q9P003 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 AC133041.1-202ENST00000642053 222 ntBASIC18.9■□□□□ 0.62
CNIH4Q9P003 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNIH4Q9P003 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
CNIH4Q9P003 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNIH4Q9P003 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNIH4Q9P003 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNIH4Q9P003 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.62
CNIH4Q9P003 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CNIH4Q9P003 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNIH4Q9P003 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.89■□□□□ 0.61
CNIH4Q9P003 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
CNIH4Q9P003 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms