Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 RARRES2P6-201ENST00000567333 442 ntBASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 AP000974.1-201ENST00000623909 2387 ntBASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ABCF3Q9NUQ8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.52■□□□□ 0.87
ABCF3Q9NUQ8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.52■□□□□ 0.87
ABCF3Q9NUQ8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCF3Q9NUQ8 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.52■□□□□ 0.87
ABCF3Q9NUQ8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 AC138932.1-201ENST00000534164 6830 ntBASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.51■□□□□ 0.87
ABCF3Q9NUQ8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCF3Q9NUQ8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 AC004408.2-201ENST00000623613 2777 ntBASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 TERF1P2-201ENST00000583350 1212 ntBASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCF3Q9NUQ8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 AC121338.2-201ENST00000622535 1744 ntBASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ABCF3Q9NUQ8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms