Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 AL136162.1-201ENST00000607711 1078 ntBASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 AC024257.2-201ENST00000549699 147 ntBASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C12orf4Q9NQ89 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 AC005224.4-201ENST00000583262 1652 ntBASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 AC105233.4-201ENST00000642045 216 ntBASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C12orf4Q9NQ89 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
C12orf4Q9NQ89 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms