Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.11■□□□□ 0.81
SSU72Q9NP77 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SSU72Q9NP77 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.11■□□□□ 0.81
SSU72Q9NP77 KRT87P-202ENST00000534226 1464 ntBASIC20.11■□□□□ 0.81
SSU72Q9NP77 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSU72Q9NP77 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
SSU72Q9NP77 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSU72Q9NP77 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSU72Q9NP77 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.1■□□□□ 0.81
SSU72Q9NP77 AL136116.3-201ENST00000402907 1138 ntBASIC20.1■□□□□ 0.81
SSU72Q9NP77 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSU72Q9NP77 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSU72Q9NP77 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSU72Q9NP77 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.1■□□□□ 0.81
SSU72Q9NP77 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
SSU72Q9NP77 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SSU72Q9NP77 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.1■□□□□ 0.81
SSU72Q9NP77 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 AC004408.2-201ENST00000623613 2777 ntBASIC20.09■□□□□ 0.81
SSU72Q9NP77 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSU72Q9NP77 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SSU72Q9NP77 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSU72Q9NP77 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SSU72Q9NP77 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSU72Q9NP77 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.08■□□□□ 0.81
SSU72Q9NP77 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.08■□□□□ 0.8
SSU72Q9NP77 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
SSU72Q9NP77 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSU72Q9NP77 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SSU72Q9NP77 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSU72Q9NP77 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSU72Q9NP77 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSU72Q9NP77 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.06■□□□□ 0.8
SSU72Q9NP77 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms