Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21■□□□□ 0.95
BRD9Q9H8M2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21■□□□□ 0.95
BRD9Q9H8M2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21■□□□□ 0.95
BRD9Q9H8M2 MIR4785-201ENST00000585005 73 ntBASIC21■□□□□ 0.95
BRD9Q9H8M2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
BRD9Q9H8M2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BRD9Q9H8M2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 KRT18P21-201ENST00000515767 1272 ntBASIC20.99■□□□□ 0.95
BRD9Q9H8M2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BRD9Q9H8M2 LINC00565-201ENST00000562710 2331 ntBASIC20.99■□□□□ 0.95
BRD9Q9H8M2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BRD9Q9H8M2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 PRKY-204ENST00000533551 1019 ntBASIC20.97■□□□□ 0.95
BRD9Q9H8M2 AC010331.1-201ENST00000611423 582 ntBASIC20.97■□□□□ 0.95
BRD9Q9H8M2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRD9Q9H8M2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 RARRES2P10-201ENST00000564312 460 ntBASIC20.96■□□□□ 0.95
BRD9Q9H8M2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
BRD9Q9H8M2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BRD9Q9H8M2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRD9Q9H8M2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.95■□□□□ 0.94
BRD9Q9H8M2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms