Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRABDQ9H4I3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
TRABDQ9H4I3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 TERF1P5-201ENST00000477545 1207 ntBASIC20.8■□□□□ 0.92
TRABDQ9H4I3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 MFSD11-216ENST00000590393 1141 ntBASIC20.8■□□□□ 0.92
TRABDQ9H4I3 BID-214ENST00000617586 542 ntTSL 5 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 AC099778.1-201ENST00000568593 1911 ntBASIC20.8■□□□□ 0.92
TRABDQ9H4I3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRABDQ9H4I3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRABDQ9H4I3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 AC011767.1-201ENST00000617410 1153 ntBASIC20.78■□□□□ 0.92
TRABDQ9H4I3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRABDQ9H4I3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 AC013268.1-206ENST00000638368 961 ntBASIC20.77■□□□□ 0.92
TRABDQ9H4I3 AC112229.1-201ENST00000639295 961 ntBASIC20.77■□□□□ 0.92
TRABDQ9H4I3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRABDQ9H4I3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRABDQ9H4I3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.91
TRABDQ9H4I3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRABDQ9H4I3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
TRABDQ9H4I3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.76■□□□□ 0.91
TRABDQ9H4I3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms