Protein–RNA interactions for Protein: Q9H2D6

TRIOBP, TRIO and F-actin-binding protein, humanhuman

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBPQ9H2D6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIOBPQ9H2D6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIOBPQ9H2D6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.9■■□□□ 1.1
TRIOBPQ9H2D6 AC008622.2-201ENST00000617006 1229 ntBASIC21.9■■□□□ 1.1
TRIOBPQ9H2D6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIOBPQ9H2D6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIOBPQ9H2D6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.89■■□□□ 1.1
TRIOBPQ9H2D6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.89■■□□□ 1.1
TRIOBPQ9H2D6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIOBPQ9H2D6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIOBPQ9H2D6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.89■■□□□ 1.1
TRIOBPQ9H2D6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 AC137767.1-201ENST00000602918 1920 ntBASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 MESTP1-201ENST00000404287 994 ntBASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
TRIOBPQ9H2D6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIOBPQ9H2D6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 AL031985.4-201ENST00000642138 673 ntBASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.87■■□□□ 1.09
TRIOBPQ9H2D6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 COX11P1-201ENST00000489116 835 ntBASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIOBPQ9H2D6 AL845331.1-201ENST00000424978 1190 ntBASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 CKBP1-201ENST00000565489 1086 ntBASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIOBPQ9H2D6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIOBPQ9H2D6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIOBPQ9H2D6 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms