Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 AC007322.3-201ENST00000426526 701 ntBASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 AC006015.1-201ENST00000429970 570 ntBASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 KRT8P36-201ENST00000489121 1440 ntBASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 RBM17P2-201ENST00000616397 1405 ntBASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.94■■□□□ 1.1
NUCKS1Q9H1E3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 AC016769.1-201ENST00000409132 1010 ntBASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NUCKS1Q9H1E3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 FAM21FP-204ENST00000608637 956 ntBASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.92■■□□□ 1.1
NUCKS1Q9H1E3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NUCKS1Q9H1E3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.9■■□□□ 1.1
NUCKS1Q9H1E3 SMG8-203ENST00000578922 2178 ntBASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NUCKS1Q9H1E3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.89■■□□□ 1.09
NUCKS1Q9H1E3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.89■■□□□ 1.09
NUCKS1Q9H1E3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.89■■□□□ 1.09
NUCKS1Q9H1E3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.89■■□□□ 1.09
NUCKS1Q9H1E3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms