Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHACTR1Q9C0D0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHACTR1Q9C0D0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.52■□□□□ 0.88
PHACTR1Q9C0D0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PHACTR1Q9C0D0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 MIR638-201ENST00000385237 100 ntBASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 AC097381.1-201ENST00000429019 1296 ntBASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 AC105265.2-201ENST00000467189 838 ntBASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 AL691432.2-201ENST00000607222 2038 ntBASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.51■□□□□ 0.87
PHACTR1Q9C0D0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 AC123595.1-201ENST00000440769 1046 ntBASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 AC116562.4-201ENST00000641316 2276 ntBASIC20.5■□□□□ 0.87
PHACTR1Q9C0D0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 AC018445.3-201ENST00000624177 1945 ntBASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PHACTR1Q9C0D0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHACTR1Q9C0D0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PHACTR1Q9C0D0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PHACTR1Q9C0D0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHACTR1Q9C0D0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms