Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL12A1Q99715 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.87■□□□□ 0.45
COL12A1Q99715 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
COL12A1Q99715 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL12A1Q99715 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
COL12A1Q99715 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.86■□□□□ 0.45
COL12A1Q99715 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 FAM86EP-206ENST00000510506 987 ntBASIC17.86■□□□□ 0.45
COL12A1Q99715 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.86■□□□□ 0.45
COL12A1Q99715 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL12A1Q99715 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 TSPY14P-201ENST00000303979 915 ntBASIC17.86■□□□□ 0.45
COL12A1Q99715 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
COL12A1Q99715 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL12A1Q99715 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.86■□□□□ 0.45
COL12A1Q99715 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL12A1Q99715 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.86■□□□□ 0.45
COL12A1Q99715 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.85■□□□□ 0.45
COL12A1Q99715 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.85■□□□□ 0.45
COL12A1Q99715 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.85■□□□□ 0.45
COL12A1Q99715 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.85■□□□□ 0.45
COL12A1Q99715 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.85■□□□□ 0.45
COL12A1Q99715 CYP21A1P-202ENST00000354927 1481 ntBASIC17.85■□□□□ 0.45
COL12A1Q99715 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.85■□□□□ 0.45
COL12A1Q99715 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COL12A1Q99715 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.85■□□□□ 0.45
COL12A1Q99715 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.85■□□□□ 0.45
COL12A1Q99715 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
COL12A1Q99715 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.85■□□□□ 0.45
COL12A1Q99715 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.85■□□□□ 0.45
COL12A1Q99715 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.85■□□□□ 0.45
COL12A1Q99715 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.85■□□□□ 0.45
COL12A1Q99715 NBPF21P-201ENST00000425093 1451 ntBASIC17.85■□□□□ 0.45
COL12A1Q99715 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL12A1Q99715 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.84■□□□□ 0.45
COL12A1Q99715 AC005332.1-201ENST00000577698 1310 ntBASIC17.84■□□□□ 0.45
COL12A1Q99715 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
COL12A1Q99715 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.84■□□□□ 0.45
COL12A1Q99715 AC091390.4-202ENST00000476426 537 ntBASIC17.84■□□□□ 0.45
COL12A1Q99715 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL12A1Q99715 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.84■□□□□ 0.45
COL12A1Q99715 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.84■□□□□ 0.45
COL12A1Q99715 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.84■□□□□ 0.45
COL12A1Q99715 AL671277.2-201ENST00000458060 996 ntBASIC17.84■□□□□ 0.45
COL12A1Q99715 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.84■□□□□ 0.45
COL12A1Q99715 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.84■□□□□ 0.45
COL12A1Q99715 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL12A1Q99715 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL12A1Q99715 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL12A1Q99715 KRT16P1-201ENST00000399124 1418 ntBASIC17.83■□□□□ 0.45
COL12A1Q99715 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL12A1Q99715 YBX1P2-201ENST00000489612 999 ntBASIC17.83■□□□□ 0.45
COL12A1Q99715 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.83■□□□□ 0.45
COL12A1Q99715 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL12A1Q99715 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.83■□□□□ 0.45
COL12A1Q99715 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.83■□□□□ 0.45
COL12A1Q99715 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.83■□□□□ 0.45
COL12A1Q99715 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.83■□□□□ 0.45
COL12A1Q99715 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL12A1Q99715 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL12A1Q99715 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.83■□□□□ 0.44
COL12A1Q99715 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.83■□□□□ 0.44
COL12A1Q99715 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
COL12A1Q99715 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL12A1Q99715 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL12A1Q99715 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL12A1Q99715 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL12A1Q99715 FAM87A-204ENST00000613235 858 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms