Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF2Q99496 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF2Q99496 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.07■□□□□ 0.16
RNF2Q99496 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RNF2Q99496 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF2Q99496 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF2Q99496 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF2Q99496 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF2Q99496 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
RNF2Q99496 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
RNF2Q99496 AC087289.5-201ENST00000586076 3175 ntBASIC16.07■□□□□ 0.16
RNF2Q99496 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF2Q99496 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RNF2Q99496 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RNF2Q99496 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF2Q99496 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF2Q99496 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF2Q99496 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 AC079140.4-201ENST00000507448 529 ntBASIC16.06■□□□□ 0.16
RNF2Q99496 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF2Q99496 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF2Q99496 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF2Q99496 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF2Q99496 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF2Q99496 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF2Q99496 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF2Q99496 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF2Q99496 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF2Q99496 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF2Q99496 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF2Q99496 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF2Q99496 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF2Q99496 AC011484.1-201ENST00000377652 1995 ntBASIC16.05■□□□□ 0.16
RNF2Q99496 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF2Q99496 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF2Q99496 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF2Q99496 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF2Q99496 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RNF2Q99496 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF2Q99496 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF2Q99496 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF2Q99496 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF2Q99496 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF2Q99496 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF2Q99496 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF2Q99496 AL512408.1-201ENST00000569378 2000 ntBASIC16.04■□□□□ 0.16
RNF2Q99496 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF2Q99496 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF2Q99496 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RNF2Q99496 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF2Q99496 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF2Q99496 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF2Q99496 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms