Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 MIR663A-201ENST00000385250 93 ntBASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 AC090192.1-201ENST00000517740 490 ntBASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NUDCD1Q96RS6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 AL050303.2-201ENST00000619798 666 ntBASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.88■□□□□ 0.93
NUDCD1Q96RS6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 RARRES2P4-201ENST00000514074 484 ntBASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 AC069236.1-201ENST00000604339 616 ntBASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.87■□□□□ 0.93
NUDCD1Q96RS6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 AC006970.2-201ENST00000450065 779 ntBASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 OR10C1-204ENST00000622521 1039 ntBASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NUDCD1Q96RS6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 AC133552.2-202ENST00000575694 574 ntBASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 AC008694.1-202ENST00000636953 945 ntBASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 PLK5-205ENST00000642079 1969 ntBASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NUDCD1Q96RS6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms