Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF48Q96MX3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC087633.2-202ENST00000565166 1439 ntBASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ZNF48Q96MX3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF48Q96MX3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 POM121L13P-201ENST00000422362 380 ntBASIC16.47■□□□□ 0.23
ZNF48Q96MX3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF48Q96MX3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 AC005229.4-201ENST00000610085 2198 ntBASIC16.46■□□□□ 0.23
ZNF48Q96MX3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF48Q96MX3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF48Q96MX3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
ZNF48Q96MX3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms