Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 AL390961.4-201ENST00000623958 2535 ntBASIC9.94□□□□□ -0.82
PRAC1Q96KF2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
PRAC1Q96KF2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 HLA-L-211ENST00000482052 1765 ntBASIC9.93□□□□□ -0.82
PRAC1Q96KF2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 TCAF2P1-201ENST00000291129 2421 ntBASIC9.93□□□□□ -0.82
PRAC1Q96KF2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PRAC1Q96KF2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PRAC1Q96KF2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms