Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 TNRC18P3-201ENST00000441896 2691 ntBASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SMG8-203ENST00000578922 2178 ntBASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SPTSSBQ8NFR3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 FAM99A-202ENST00000538190 1989 ntBASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SPTSSBQ8NFR3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms