Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCSK9Q8NBP7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 RN7SL850P-201ENST00000579959 291 ntBASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCSK9Q8NBP7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 AL445228.2-201ENST00000605589 952 ntBASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
PCSK9Q8NBP7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 AC145285.6-201ENST00000604632 637 ntBASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 AC124283.5-201ENST00000624661 1809 ntBASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCSK9Q8NBP7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 NUDT16P1-203ENST00000513809 620 ntBASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 KRT8P36-201ENST00000489121 1440 ntBASIC22.48■■□□□ 1.19
PCSK9Q8NBP7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 UNC93B2-201ENST00000285383 730 ntBASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 AP002982.1-201ENST00000492365 877 ntBASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 AC092865.7-201ENST00000641832 219 ntBASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 AC027702.1-201ENST00000563810 1770 ntBASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCSK9Q8NBP7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 RBM17P1-201ENST00000453646 1190 ntBASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 AC005363.2-201ENST00000618631 242 ntBASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCSK9Q8NBP7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms