Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC30.33■■■□□ 2.45
ABCA6Q8N139 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ABCA6Q8N139 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC30.33■■■□□ 2.45
ABCA6Q8N139 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.33■■■□□ 2.45
ABCA6Q8N139 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.33■■■□□ 2.45
ABCA6Q8N139 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ABCA6Q8N139 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.45
ABCA6Q8N139 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ABCA6Q8N139 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ABCA6Q8N139 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ABCA6Q8N139 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ABCA6Q8N139 AC010203.1-204ENST00000548782 407 ntBASIC30.32■■■□□ 2.44
ABCA6Q8N139 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC30.32■■■□□ 2.44
ABCA6Q8N139 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ABCA6Q8N139 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.31■■■□□ 2.44
ABCA6Q8N139 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
ABCA6Q8N139 KRT16P1-201ENST00000399124 1418 ntBASIC30.31■■■□□ 2.44
ABCA6Q8N139 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ABCA6Q8N139 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ABCA6Q8N139 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ABCA6Q8N139 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.3■■■□□ 2.44
ABCA6Q8N139 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ABCA6Q8N139 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ABCA6Q8N139 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ABCA6Q8N139 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
ABCA6Q8N139 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
ABCA6Q8N139 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
ABCA6Q8N139 AP002982.1-201ENST00000492365 877 ntBASIC30.29■■■□□ 2.44
ABCA6Q8N139 USF2-205ENST00000594064 1179 ntTSL 2 BASIC30.29■■■□□ 2.44
ABCA6Q8N139 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ABCA6Q8N139 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ABCA6Q8N139 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC30.29■■■□□ 2.44
ABCA6Q8N139 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ABCA6Q8N139 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
ABCA6Q8N139 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.29■■■□□ 2.44
ABCA6Q8N139 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
ABCA6Q8N139 KRT18P22-201ENST00000402024 1347 ntBASIC30.28■■■□□ 2.44
ABCA6Q8N139 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
ABCA6Q8N139 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.28■■■□□ 2.44
ABCA6Q8N139 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.28■■■□□ 2.44
ABCA6Q8N139 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ABCA6Q8N139 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC30.28■■■□□ 2.44
ABCA6Q8N139 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC30.27■■■□□ 2.44
ABCA6Q8N139 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ABCA6Q8N139 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
ABCA6Q8N139 AC104076.2-201ENST00000448912 469 ntBASIC30.27■■■□□ 2.44
ABCA6Q8N139 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
ABCA6Q8N139 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.27■■■□□ 2.44
ABCA6Q8N139 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
ABCA6Q8N139 STK25-205ENST00000405883 1904 ntTSL 2 BASIC30.27■■■□□ 2.44
ABCA6Q8N139 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.26■■■□□ 2.44
ABCA6Q8N139 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
ABCA6Q8N139 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
ABCA6Q8N139 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.44
ABCA6Q8N139 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.26■■■□□ 2.44
ABCA6Q8N139 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.44
ABCA6Q8N139 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.26■■■□□ 2.44
ABCA6Q8N139 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.26■■■□□ 2.44
ABCA6Q8N139 C1orf229-201ENST00000623686 2258 ntBASIC30.26■■■□□ 2.44
ABCA6Q8N139 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
ABCA6Q8N139 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC30.26■■■□□ 2.43
ABCA6Q8N139 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ABCA6Q8N139 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
ABCA6Q8N139 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.26■■■□□ 2.43
ABCA6Q8N139 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
ABCA6Q8N139 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
ABCA6Q8N139 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ABCA6Q8N139 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.25■■■□□ 2.43
ABCA6Q8N139 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
ABCA6Q8N139 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC30.25■■■□□ 2.43
ABCA6Q8N139 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
ABCA6Q8N139 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 AL137013.1-201ENST00000432946 1228 ntBASIC30.25■■■□□ 2.43
ABCA6Q8N139 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
ABCA6Q8N139 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.25■■■□□ 2.43
ABCA6Q8N139 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC30.24■■■□□ 2.43
ABCA6Q8N139 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
ABCA6Q8N139 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
ABCA6Q8N139 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC30.24■■■□□ 2.43
ABCA6Q8N139 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.24■■■□□ 2.43
ABCA6Q8N139 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.24■■■□□ 2.43
ABCA6Q8N139 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ABCA6Q8N139 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ABCA6Q8N139 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
ABCA6Q8N139 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ABCA6Q8N139 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC30.23■■■□□ 2.43
ABCA6Q8N139 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms