Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CYP2T3P-201ENST00000601990 817 ntBASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 AL162377.1-201ENST00000618844 1793 ntBASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC65Q8IXS2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 AC010980.2-201ENST00000587099 1412 ntBASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 AC133552.2-202ENST00000575694 574 ntBASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC65Q8IXS2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 AC093787.1-201ENST00000450396 207 ntBASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC65Q8IXS2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 MIR663A-201ENST00000385250 93 ntBASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 AL355472.2-201ENST00000422958 438 ntBASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 AC092666.2-201ENST00000613287 246 ntBASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 AL050303.2-201ENST00000619798 666 ntBASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 AC105020.6-201ENST00000621523 1217 ntBASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CCDC65Q8IXS2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 DPP3P2-201ENST00000416030 1696 ntBASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms