Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.84■□□□□ 0.45
RTTNQ86VV8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTTNQ86VV8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.83■□□□□ 0.45
RTTNQ86VV8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTTNQ86VV8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.83■□□□□ 0.44
RTTNQ86VV8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.83■□□□□ 0.44
RTTNQ86VV8 AC121338.2-201ENST00000622535 1744 ntBASIC17.83■□□□□ 0.44
RTTNQ86VV8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTTNQ86VV8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.82■□□□□ 0.44
RTTNQ86VV8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 AC142381.4-202ENST00000563973 229 ntBASIC17.82■□□□□ 0.44
RTTNQ86VV8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTTNQ86VV8 AL591742.1-201ENST00000604433 565 ntBASIC17.82■□□□□ 0.44
RTTNQ86VV8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTTNQ86VV8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 AL596275.1-201ENST00000423464 877 ntBASIC17.81■□□□□ 0.44
RTTNQ86VV8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RTTNQ86VV8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTTNQ86VV8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 MIR2861-201ENST00000636310 90 ntBASIC17.8■□□□□ 0.44
RTTNQ86VV8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.8■□□□□ 0.44
RTTNQ86VV8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTTNQ86VV8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTTNQ86VV8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTTNQ86VV8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTTNQ86VV8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTTNQ86VV8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTTNQ86VV8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms