Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 FAM99A-202ENST00000538190 1989 ntBASIC13.34□□□□□ -0.27
SCXQ7RTU7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCXQ7RTU7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SCXQ7RTU7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
SCXQ7RTU7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.33□□□□□ -0.27
SCXQ7RTU7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 AC073210.2-201ENST00000430369 194 ntBASIC13.33□□□□□ -0.28
SCXQ7RTU7 AC093787.1-201ENST00000450396 207 ntBASIC13.33□□□□□ -0.28
SCXQ7RTU7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCXQ7RTU7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SCXQ7RTU7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 MIPEPP3-201ENST00000412105 444 ntBASIC13.32□□□□□ -0.28
SCXQ7RTU7 MIR4651-201ENST00000582622 73 ntBASIC13.32□□□□□ -0.28
SCXQ7RTU7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC13.32□□□□□ -0.28
SCXQ7RTU7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCXQ7RTU7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SCXQ7RTU7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SCXQ7RTU7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms