Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DCLRE1AQ6PJP8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCLRE1AQ6PJP8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.73■■□□□ 1.07
DCLRE1AQ6PJP8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
DCLRE1AQ6PJP8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCLRE1AQ6PJP8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
DCLRE1AQ6PJP8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
DCLRE1AQ6PJP8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
DCLRE1AQ6PJP8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.7■■□□□ 1.07
DCLRE1AQ6PJP8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
DCLRE1AQ6PJP8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 AC023632.3-201ENST00000521633 145 ntBASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 FAM197Y4-202ENST00000622692 608 ntBASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 AC026310.3-201ENST00000625186 2373 ntBASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DCLRE1AQ6PJP8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.68■■□□□ 1.06
DCLRE1AQ6PJP8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.67■■□□□ 1.06
DCLRE1AQ6PJP8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms