Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 IGHV3-19-201ENST00000521488 291 ntBASIC17.57■□□□□ 0.4
C11orf88Q6PI97 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 AL031602.1-201ENST00000633169 911 ntBASIC17.57■□□□□ 0.4
C11orf88Q6PI97 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 SMG8-203ENST00000578922 2178 ntBASIC17.57■□□□□ 0.4
C11orf88Q6PI97 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
C11orf88Q6PI97 AC018445.3-201ENST00000624177 1945 ntBASIC17.57■□□□□ 0.4
C11orf88Q6PI97 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 SLC47A1P1-202ENST00000449666 945 ntBASIC17.56■□□□□ 0.4
C11orf88Q6PI97 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
C11orf88Q6PI97 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 YBX1P1-201ENST00000445822 960 ntBASIC17.55■□□□□ 0.4
C11orf88Q6PI97 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 AC087623.3-201ENST00000607047 1098 ntBASIC17.55■□□□□ 0.4
C11orf88Q6PI97 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C11orf88Q6PI97 AC112907.3-201ENST00000577781 2400 ntBASIC17.55■□□□□ 0.4
C11orf88Q6PI97 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 TSPY26P-201ENST00000476365 1326 ntBASIC17.54■□□□□ 0.4
C11orf88Q6PI97 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 AC034268.1-201ENST00000441047 882 ntBASIC17.54■□□□□ 0.4
C11orf88Q6PI97 AL162430.1-201ENST00000480705 870 ntBASIC17.54■□□□□ 0.4
C11orf88Q6PI97 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 AL354811.1-201ENST00000610286 706 ntBASIC17.54■□□□□ 0.4
C11orf88Q6PI97 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C11orf88Q6PI97 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C11orf88Q6PI97 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms