Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC105020.6-201ENST00000621523 1217 ntBASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RFWD3Q6PCD5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RFWD3Q6PCD5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 TSPY20P-201ENST00000450910 630 ntBASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 AC007952.6-201ENST00000573168 2673 ntBASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 AC003957.1-201ENST00000625108 2673 ntBASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFWD3Q6PCD5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 AC027702.1-201ENST00000563810 1770 ntBASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.08■□□□□ 0.97
RFWD3Q6PCD5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.08■□□□□ 0.96
RFWD3Q6PCD5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.08■□□□□ 0.96
RFWD3Q6PCD5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFWD3Q6PCD5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFWD3Q6PCD5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFWD3Q6PCD5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFWD3Q6PCD5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 ABHD17AP1-201ENST00000358206 933 ntBASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 AL356652.1-201ENST00000615962 565 ntBASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFWD3Q6PCD5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms