Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
LYSMD4Q5XG99 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD4Q5XG99 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 ARMC10P1-201ENST00000313754 855 ntBASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 MIR6786-201ENST00000616843 113 ntBASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD4Q5XG99 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 AL049597.2-201ENST00000565575 961 ntBASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 AC145285.6-201ENST00000604632 637 ntBASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 AC005363.2-201ENST00000618631 242 ntBASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 AC092865.7-201ENST00000641832 219 ntBASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LYSMD4Q5XG99 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 RBM17P1-201ENST00000453646 1190 ntBASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 AP002982.1-201ENST00000492365 877 ntBASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 AL590326.2-201ENST00000625139 305 ntBASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 AC011484.1-201ENST00000377652 1995 ntBASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LYSMD4Q5XG99 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 UNC93B2-201ENST00000285383 730 ntBASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 NUDT16P1-203ENST00000513809 620 ntBASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.96■□□□□ 0.79
LYSMD4Q5XG99 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms