Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 AL158211.5-201ENST00000623583 2518 ntBASIC19.45■□□□□ 0.7
RNF220Q5VTB9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF220Q5VTB9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.44■□□□□ 0.7
RNF220Q5VTB9 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF220Q5VTB9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 AC012414.1-201ENST00000556676 535 ntBASIC19.43■□□□□ 0.7
RNF220Q5VTB9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF220Q5VTB9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF220Q5VTB9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 AC020907.5-201ENST00000624372 1936 ntBASIC19.41■□□□□ 0.7
RNF220Q5VTB9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF220Q5VTB9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms