Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 PTBP1P-201ENST00000554374 1601 ntBASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 KRT8P36-201ENST00000489121 1440 ntBASIC17.24■□□□□ 0.35
ARFGEF3Q5TH69 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 RPPH1-201ENST00000516869 333 ntBASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 FAM197Y4-202ENST00000622692 608 ntBASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARFGEF3Q5TH69 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 AC120498.8-201ENST00000614275 531 ntBASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 UBE2SP1-201ENST00000450587 669 ntBASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ARFGEF3Q5TH69 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 AC005829.2-201ENST00000571422 1056 ntBASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.21■□□□□ 0.35
ARFGEF3Q5TH69 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARFGEF3Q5TH69 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
ARFGEF3Q5TH69 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ARFGEF3Q5TH69 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.21■□□□□ 0.34
ARFGEF3Q5TH69 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.21■□□□□ 0.34
ARFGEF3Q5TH69 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.21■□□□□ 0.34
ARFGEF3Q5TH69 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms