Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 AC010542.4-201ENST00000563151 1910 ntBASIC17.76■□□□□ 0.43
LRRK2Q5S007 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.76■□□□□ 0.43
LRRK2Q5S007 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRK2Q5S007 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 EGLN1P1-201ENST00000531623 762 ntBASIC17.75■□□□□ 0.43
LRRK2Q5S007 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 MESTP1-201ENST00000404287 994 ntBASIC17.75■□□□□ 0.43
LRRK2Q5S007 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 AC011558.1-201ENST00000623459 338 ntBASIC17.75■□□□□ 0.43
LRRK2Q5S007 AL031985.4-201ENST00000642138 673 ntBASIC17.75■□□□□ 0.43
LRRK2Q5S007 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRK2Q5S007 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRK2Q5S007 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 AC117947.1-201ENST00000427448 529 ntBASIC17.74■□□□□ 0.43
LRRK2Q5S007 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 AC246785.2-201ENST00000432512 513 ntBASIC17.74■□□□□ 0.43
LRRK2Q5S007 RN7SL510P-201ENST00000581311 263 ntBASIC17.74■□□□□ 0.43
LRRK2Q5S007 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 PVRIG2P-201ENST00000435460 978 ntBASIC17.74■□□□□ 0.43
LRRK2Q5S007 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 AL445675.2-201ENST00000620291 557 ntBASIC17.74■□□□□ 0.43
LRRK2Q5S007 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 KRT8P45-201ENST00000414328 1447 ntBASIC17.74■□□□□ 0.43
LRRK2Q5S007 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRRK2Q5S007 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRK2Q5S007 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 AC139530.1-201ENST00000575312 1977 ntBASIC17.73■□□□□ 0.43
LRRK2Q5S007 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 PGM5P4-201ENST00000421970 445 ntBASIC17.73■□□□□ 0.43
LRRK2Q5S007 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRK2Q5S007 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRRK2Q5S007 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRK2Q5S007 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRRK2Q5S007 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms