Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 GUSBP6-202ENST00000438529 1198 ntBASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 AC083906.2-201ENST00000511578 360 ntBASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 AL121832.2-201ENST00000610979 668 ntBASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 DPP3P2-201ENST00000416030 1696 ntBASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.37■■□□□ 1.01
PTPN20Q4JDL3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 NCF1B-203ENST00000435988 1254 ntBASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 AC090192.1-201ENST00000517740 490 ntBASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTPN20Q4JDL3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 AL589743.5-201ENST00000616611 1050 ntBASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
PTPN20Q4JDL3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTPN20Q4JDL3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 AL391422.3-201ENST00000603791 2761 ntBASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTPN20Q4JDL3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTPN20Q4JDL3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PTPN20Q4JDL3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.33■■□□□ 1
PTPN20Q4JDL3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTPN20Q4JDL3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms