Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.8■■□□□ 1.4
SHROOM1Q2M3G4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 AL121603.2-201ENST00000557373 2117 ntBASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHROOM1Q2M3G4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 AC239809.2-201ENST00000415381 517 ntBASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 TSPY15P-201ENST00000457163 923 ntBASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 PLK5-205ENST00000642079 1969 ntBASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHROOM1Q2M3G4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 AC121338.2-201ENST00000622535 1744 ntBASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 MIR718-201ENST00000390190 70 ntBASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 AC133681.1-201ENST00000465482 601 ntBASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SHROOM1Q2M3G4 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.76■■□□□ 1.39
SHROOM1Q2M3G4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 LINC00565-201ENST00000562710 2331 ntBASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 RPS2P55-201ENST00000397318 883 ntBASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 AC107956.1-201ENST00000494359 873 ntBASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.75■■□□□ 1.39
SHROOM1Q2M3G4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 AC233702.5-201ENST00000584107 538 ntBASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.74■■□□□ 1.39
SHROOM1Q2M3G4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms