Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 YLR222C-AYLR222C-A 231 nt1.7□□□□□ -2.14
VTI1Q04338 RPB11YOL005C 363 nt1.7□□□□□ -2.14
VTI1Q04338 YOR105WYOR105W 327 nt1.7□□□□□ -2.14
VTI1Q04338 MDM32YOR147W 1869 nt1.7□□□□□ -2.14
VTI1Q04338 MEC1YBR136W 7107 nt1.7□□□□□ -2.14
VTI1Q04338 YSW1YBR148W 1830 nt1.7□□□□□ -2.14
VTI1Q04338 SXM1YDR395W 2835 nt1.7□□□□□ -2.14
VTI1Q04338 CMC2YBL059C-A 330 nt1.69□□□□□ -2.14
VTI1Q04338 YOR192C-CYOR192C-C 237 nt1.69□□□□□ -2.14
VTI1Q04338 DAS1YJL149W 1992 nt1.68□□□□□ -2.14
VTI1Q04338 YGL069CYGL069C 465 nt1.68□□□□□ -2.14
VTI1Q04338 SPC1YJR010C-A 285 nt1.68□□□□□ -2.14
VTI1Q04338 YKL111CYKL111C 336 nt1.68□□□□□ -2.14
VTI1Q04338 YLR171WYLR171W 390 nt1.68□□□□□ -2.14
VTI1Q04338 YML108WYML108W 318 nt1.68□□□□□ -2.14
VTI1Q04338 YBL108WYBL108W 306 nt1.68□□□□□ -2.14
VTI1Q04338 YCL023CYCL023C 348 nt1.68□□□□□ -2.14
VTI1Q04338 VPS52YDR484W 1926 nt1.68□□□□□ -2.14
VTI1Q04338 HMI1YOL095C 2121 nt1.67□□□□□ -2.14
VTI1Q04338 IRE1YHR079C 3348 nt1.67□□□□□ -2.14
VTI1Q04338 BST1YFL025C 3090 nt1.67□□□□□ -2.14
VTI1Q04338 ATP17YDR377W 306 nt1.67□□□□□ -2.14
VTI1Q04338 YER135CYER135C 393 nt1.67□□□□□ -2.14
VTI1Q04338 LSO2YGR169C-A 279 nt1.67□□□□□ -2.14
VTI1Q04338 YHR214W-AYHR214W-A 486 nt1.67□□□□□ -2.14
VTI1Q04338 HSK3YKL138C-A 210 nt1.67□□□□□ -2.14
VTI1Q04338 YAR068WYAR068W 486 nt1.67□□□□□ -2.14
VTI1Q04338 SNC2YOR327C 348 nt1.67□□□□□ -2.14
VTI1Q04338 RTC6YPL183W-A 282 nt1.67□□□□□ -2.14
VTI1Q04338 SWT1YOR166C 1377 nt1.67□□□□□ -2.14
VTI1Q04338 YBP1YBR216C 2025 nt1.67□□□□□ -2.14
VTI1Q04338 SPC110YDR356W 2835 nt1.67□□□□□ -2.14
VTI1Q04338 YBR012W-AYBR012W-A 1323 nt1.66□□□□□ -2.14
VTI1Q04338 YOR142W-AYOR142W-A 1323 nt1.66□□□□□ -2.14
VTI1Q04338 YPR158W-AYPR158W-A 1323 nt1.66□□□□□ -2.14
VTI1Q04338 YER188C-AYER188C-A 300 nt1.66□□□□□ -2.14
VTI1Q04338 YOR248WYOR248W 303 nt1.66□□□□□ -2.14
VTI1Q04338 YOR394C-AYOR394C-A 168 nt1.66□□□□□ -2.14
VTI1Q04338 YPL205CYPL205C 345 nt1.66□□□□□ -2.14
VTI1Q04338 PPN1YDR452W 2025 nt1.66□□□□□ -2.14
VTI1Q04338 GDS1YOR355W 1569 nt1.65□□□□□ -2.15
VTI1Q04338 YDL041WYDL041W 354 nt1.65□□□□□ -2.15
VTI1Q04338 YGL024WYGL024W 336 nt1.65□□□□□ -2.15
VTI1Q04338 HUR1YGL168W 333 nt1.65□□□□□ -2.15
VTI1Q04338 YGR025WYGR025W 303 nt1.65□□□□□ -2.15
VTI1Q04338 BIG1YHR101C 1008 nt1.65□□□□□ -2.15
VTI1Q04338 tT(UGU)Q1tT(UGU)Q1 76 nt1.65□□□□□ -2.15
VTI1Q04338 MCM22YJR135C 720 nt1.65□□□□□ -2.15
VTI1Q04338 SEN15YMR059W 387 nt1.65□□□□□ -2.15
VTI1Q04338 BRR2YER172C 6492 nt1.65□□□□□ -2.15
VTI1Q04338 ATG11YPR049C 3537 nt1.64□□□□□ -2.15
VTI1Q04338 CTR9YOL145C 3234 nt1.64□□□□□ -2.15
VTI1Q04338 SLM1YIL105C 2061 nt1.64□□□□□ -2.15
VTI1Q04338 RBK1YCR036W 1002 nt1.64□□□□□ -2.15
VTI1Q04338 YDL068WYDL068W 330 nt1.64□□□□□ -2.15
VTI1Q04338 YHR130CYHR130C 336 nt1.64□□□□□ -2.15
VTI1Q04338 RRT1YBL048W 312 nt1.64□□□□□ -2.15
VTI1Q04338 YGR250CYGR250C 2346 nt1.64□□□□□ -2.15
VTI1Q04338 MNL2YLR057W 2550 nt1.63□□□□□ -2.15
VTI1Q04338 YER088C-AYER088C-A 324 nt1.63□□□□□ -2.15
VTI1Q04338 VOA1YGR106C 798 nt1.63□□□□□ -2.15
VTI1Q04338 YMR153C-AYMR153C-A 336 nt1.63□□□□□ -2.15
VTI1Q04338 COA6YMR244C-A 315 nt1.63□□□□□ -2.15
VTI1Q04338 TSC3YBR058C-A 243 nt1.63□□□□□ -2.15
VTI1Q04338 PRM3YPL192C 402 nt1.63□□□□□ -2.15
VTI1Q04338 YPR039WYPR039W 336 nt1.63□□□□□ -2.15
VTI1Q04338 ROX1YPR065W 1107 nt1.63□□□□□ -2.15
VTI1Q04338 POL5YEL055C 3069 nt1.62□□□□□ -2.15
VTI1Q04338 HMLALPHA2YCL067C 633 nt1.62□□□□□ -2.15
VTI1Q04338 MATALPHA2YCR039C 633 nt1.62□□□□□ -2.15
VTI1Q04338 snR79snR79 84 nt1.62□□□□□ -2.15
VTI1Q04338 YLR101CYLR101C 396 nt1.62□□□□□ -2.15
VTI1Q04338 GPX2YBR244W 489 nt1.62□□□□□ -2.15
VTI1Q04338 RKM1YPL208W 1752 nt1.62□□□□□ -2.15
VTI1Q04338 SSK2YNR031C 4740 nt1.61□□□□□ -2.15
VTI1Q04338 CLU1YMR012W 3834 nt1.61□□□□□ -2.15
VTI1Q04338 DNF3YMR162C 4971 nt1.61□□□□□ -2.15
VTI1Q04338 YGR042WYGR042W 816 nt1.61□□□□□ -2.15
VTI1Q04338 NBL1YHR199C-A 222 nt1.61□□□□□ -2.15
VTI1Q04338 SEC22YLR268W 645 nt1.61□□□□□ -2.15
VTI1Q04338 snR13snR13 124 nt1.61□□□□□ -2.15
VTI1Q04338 YBR121C-AYBR121C-A 159 nt1.61□□□□□ -2.15
VTI1Q04338 YBR174CYBR174C 315 nt1.61□□□□□ -2.15
VTI1Q04338 PEX8YGR077C 1770 nt1.61□□□□□ -2.15
VTI1Q04338 KAR3YPR141C 2190 nt1.6□□□□□ -2.15
VTI1Q04338 YJL007CYJL007C 315 nt1.6□□□□□ -2.15
VTI1Q04338 NFU1YKL040C 771 nt1.6□□□□□ -2.15
VTI1Q04338 YBR032WYBR032W 303 nt1.6□□□□□ -2.15
VTI1Q04338 YPR146CYPR146C 330 nt1.6□□□□□ -2.15
VTI1Q04338 HIR3YJR140C 4947 nt1.6□□□□□ -2.15
VTI1Q04338 MSN5YDR335W 3675 nt1.6□□□□□ -2.15
VTI1Q04338 ECL1YGR146C 636 nt1.59□□□□□ -2.15
VTI1Q04338 TRM3YDL112W 4311 nt1.58□□□□□ -2.16
VTI1Q04338 tQ(UUG)E2tQ(UUG)E2 72 nt1.58□□□□□ -2.16
VTI1Q04338 YLR140WYLR140W 327 nt1.58□□□□□ -2.16
VTI1Q04338 YLR264C-AYLR264C-A 117 nt1.58□□□□□ -2.16
VTI1Q04338 UBC7YMR022W 498 nt1.58□□□□□ -2.16
VTI1Q04338 SLM6YBR266C 453 nt1.58□□□□□ -2.16
VTI1Q04338 snR54snR54 86 nt1.58□□□□□ -2.16
VTI1Q04338 NCA2YPR155C 1851 nt1.58□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms