Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CBX1P83916 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CBX1P83916 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CBX1P83916 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.23■□□□□ 0.99
CBX1P83916 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.23■□□□□ 0.99
CBX1P83916 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.22■□□□□ 0.99
CBX1P83916 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
CBX1P83916 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CBX1P83916 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CBX1P83916 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
CBX1P83916 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CBX1P83916 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.22■□□□□ 0.99
CBX1P83916 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CBX1P83916 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.21■□□□□ 0.99
CBX1P83916 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CBX1P83916 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.21■□□□□ 0.99
CBX1P83916 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.21■□□□□ 0.99
CBX1P83916 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.21■□□□□ 0.99
CBX1P83916 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.21■□□□□ 0.99
CBX1P83916 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.21■□□□□ 0.99
CBX1P83916 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.21■□□□□ 0.99
CBX1P83916 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.21■□□□□ 0.99
CBX1P83916 ECEL1P2-201ENST00000461596 1295 ntBASIC21.21■□□□□ 0.99
CBX1P83916 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CBX1P83916 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CBX1P83916 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.2■□□□□ 0.99
CBX1P83916 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CBX1P83916 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CBX1P83916 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CBX1P83916 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CBX1P83916 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.2■□□□□ 0.98
CBX1P83916 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CBX1P83916 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CBX1P83916 AC026202.3-201ENST00000600805 1127 ntBASIC21.2■□□□□ 0.98
CBX1P83916 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CBX1P83916 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CBX1P83916 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CBX1P83916 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.2■□□□□ 0.98
CBX1P83916 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.19■□□□□ 0.98
CBX1P83916 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CBX1P83916 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CBX1P83916 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.19■□□□□ 0.98
CBX1P83916 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.19■□□□□ 0.98
CBX1P83916 AC016575.1-201ENST00000607026 382 ntBASIC21.19■□□□□ 0.98
CBX1P83916 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CBX1P83916 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.19■□□□□ 0.98
CBX1P83916 FP325331.1-202ENST00000623531 1380 ntBASIC21.19■□□□□ 0.98
CBX1P83916 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CBX1P83916 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.19■□□□□ 0.98
CBX1P83916 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CBX1P83916 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CBX1P83916 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
CBX1P83916 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.18■□□□□ 0.98
CBX1P83916 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX1P83916 NOC2LP2-201ENST00000407594 1944 ntBASIC21.18■□□□□ 0.98
CBX1P83916 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX1P83916 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.18■□□□□ 0.98
CBX1P83916 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX1P83916 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX1P83916 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CBX1P83916 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms