Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC007322.1-201ENST00000426983 750 ntBASIC17.73■□□□□ 0.43
HIST1H3AP68431 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 AC099778.1-201ENST00000568593 1911 ntBASIC17.72■□□□□ 0.43
HIST1H3AP68431 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 CYP2T1P-201ENST00000432607 1285 ntBASIC17.72■□□□□ 0.43
HIST1H3AP68431 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST1H3AP68431 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST1H3AP68431 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST1H3AP68431 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST1H3AP68431 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST1H3AP68431 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST1H3AP68431 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.71■□□□□ 0.43
HIST1H3AP68431 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
HIST1H3AP68431 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H3AP68431 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HIST1H3AP68431 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HIST1H3AP68431 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 MIR935-201ENST00000401179 91 ntBASIC17.7■□□□□ 0.42
HIST1H3AP68431 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 AC069236.1-201ENST00000604339 616 ntBASIC17.7■□□□□ 0.42
HIST1H3AP68431 OR10C1-204ENST00000622521 1039 ntBASIC17.7■□□□□ 0.42
HIST1H3AP68431 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H3AP68431 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H3AP68431 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H3AP68431 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 SMG8-203ENST00000578922 2178 ntBASIC17.69■□□□□ 0.42
HIST1H3AP68431 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 DPP3P2-201ENST00000416030 1696 ntBASIC17.69■□□□□ 0.42
HIST1H3AP68431 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H3AP68431 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 AC004911.1-201ENST00000416316 871 ntBASIC17.69■□□□□ 0.42
HIST1H3AP68431 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H3AP68431 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H3AP68431 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H3AP68431 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H3AP68431 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms