Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SEC61A1P61619 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
SEC61A1P61619 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SEC61A1P61619 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SEC61A1P61619 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.65■□□□□ 0.42
SEC61A1P61619 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 CDCA4P2-201ENST00000441182 718 ntBASIC17.65■□□□□ 0.42
SEC61A1P61619 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.65■□□□□ 0.42
SEC61A1P61619 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.65■□□□□ 0.42
SEC61A1P61619 AC073314.1-201ENST00000568729 2216 ntBASIC17.65■□□□□ 0.42
SEC61A1P61619 BX323043.1-201ENST00000641006 1765 ntBASIC17.65■□□□□ 0.42
SEC61A1P61619 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.65■□□□□ 0.42
SEC61A1P61619 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SEC61A1P61619 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.65■□□□□ 0.42
SEC61A1P61619 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SEC61A1P61619 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SEC61A1P61619 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.64■□□□□ 0.42
SEC61A1P61619 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.64■□□□□ 0.41
SEC61A1P61619 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.64■□□□□ 0.41
SEC61A1P61619 EEF1DP3-203ENST00000566025 782 ntBASIC17.64■□□□□ 0.41
SEC61A1P61619 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.64■□□□□ 0.41
SEC61A1P61619 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.64■□□□□ 0.41
SEC61A1P61619 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SEC61A1P61619 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SEC61A1P61619 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.64■□□□□ 0.41
SEC61A1P61619 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.64■□□□□ 0.41
SEC61A1P61619 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SEC61A1P61619 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.63■□□□□ 0.41
SEC61A1P61619 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SEC61A1P61619 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.63■□□□□ 0.41
SEC61A1P61619 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.63■□□□□ 0.41
SEC61A1P61619 KRT18P11-201ENST00000435214 1283 ntBASIC17.63■□□□□ 0.41
SEC61A1P61619 AC010141.2-201ENST00000452426 721 ntBASIC17.63■□□□□ 0.41
SEC61A1P61619 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.63■□□□□ 0.41
SEC61A1P61619 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 MFSD11-216ENST00000590393 1141 ntBASIC17.63■□□□□ 0.41
SEC61A1P61619 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 RAP2CP1-201ENST00000605103 478 ntBASIC17.63■□□□□ 0.41
SEC61A1P61619 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.63■□□□□ 0.41
SEC61A1P61619 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.63■□□□□ 0.41
SEC61A1P61619 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SEC61A1P61619 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SEC61A1P61619 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SEC61A1P61619 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SEC61A1P61619 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SEC61A1P61619 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.62■□□□□ 0.41
SEC61A1P61619 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.62■□□□□ 0.41
SEC61A1P61619 AL049796.1-201ENST00000565336 1766 ntBASIC17.62■□□□□ 0.41
SEC61A1P61619 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SEC61A1P61619 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.62■□□□□ 0.41
SEC61A1P61619 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.62■□□□□ 0.41
SEC61A1P61619 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.62■□□□□ 0.41
SEC61A1P61619 AC138907.5-202ENST00000569484 235 ntBASIC17.62■□□□□ 0.41
SEC61A1P61619 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SEC61A1P61619 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SEC61A1P61619 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms