Protein–RNA interactions for Protein: P53953

SFB2, SED5-binding protein 2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB2P53953 tW(CCA)G1tW(CCA)G1 72 nt2.87□□□□□ -1.95
SFB2P53953 tW(CCA)G2tW(CCA)G2 72 nt2.87□□□□□ -1.95
SFB2P53953 tW(CCA)JtW(CCA)J 72 nt2.87□□□□□ -1.95
SFB2P53953 tW(CCA)KtW(CCA)K 72 nt2.87□□□□□ -1.95
SFB2P53953 tW(CCA)MtW(CCA)M 72 nt2.87□□□□□ -1.95
SFB2P53953 tW(CCA)PtW(CCA)P 72 nt2.87□□□□□ -1.95
SFB2P53953 PCC1YKR095W-A 267 nt2.87□□□□□ -1.95
SFB2P53953 VMA9YCL005W-A 222 nt2.87□□□□□ -1.95
SFB2P53953 TAO3YIL129C 7131 nt2.87□□□□□ -1.95
SFB2P53953 SNU114YKL173W 3027 nt2.87□□□□□ -1.95
SFB2P53953 YGL069CYGL069C 465 nt2.86□□□□□ -1.95
SFB2P53953 YLR466C-BYLR466C-B 117 nt2.86□□□□□ -1.95
SFB2P53953 IES4YOR189W 351 nt2.86□□□□□ -1.95
SFB2P53953 snR43snR43 209 nt2.86□□□□□ -1.95
SFB2P53953 MDM1YML104C 3384 nt2.86□□□□□ -1.95
SFB2P53953 ILS1YBL076C 3219 nt2.85□□□□□ -1.95
SFB2P53953 PAN3YKL025C 2040 nt2.85□□□□□ -1.95
SFB2P53953 KEL2YGR238C 2649 nt2.85□□□□□ -1.95
SFB2P53953 RPA34YJL148W 702 nt2.85□□□□□ -1.95
SFB2P53953 CYB5YNL111C 363 nt2.85□□□□□ -1.95
SFB2P53953 PRP6YBR055C 2700 nt2.85□□□□□ -1.95
SFB2P53953 SWR1YDR334W 4545 nt2.85□□□□□ -1.95
SFB2P53953 SOK2YMR016C 2358 nt2.85□□□□□ -1.95
SFB2P53953 YGR151CYGR151C 336 nt2.84□□□□□ -1.95
SFB2P53953 YML007C-AYML007C-A 111 nt2.84□□□□□ -1.95
SFB2P53953 SNC2YOR327C 348 nt2.84□□□□□ -1.95
SFB2P53953 VPS35YJL154C 2835 nt2.83□□□□□ -1.96
SFB2P53953 JSN1YJR091C 3276 nt2.83□□□□□ -1.96
SFB2P53953 HDA3YPR179C 1968 nt2.83□□□□□ -1.96
SFB2P53953 MMS22YLR320W 4365 nt2.83□□□□□ -1.96
SFB2P53953 YML037CYML037C 1023 nt2.83□□□□□ -1.96
SFB2P53953 YOL160WYOL160W 342 nt2.83□□□□□ -1.96
SFB2P53953 LCL1YPL056C 306 nt2.83□□□□□ -1.96
SFB2P53953 YGR250CYGR250C 2346 nt2.83□□□□□ -1.96
SFB2P53953 ESC1YMR219W 4977 nt2.83□□□□□ -1.96
SFB2P53953 YIL169CYIL169C 2988 nt2.83□□□□□ -1.96
SFB2P53953 GUP1YGL084C 1683 nt2.82□□□□□ -1.96
SFB2P53953 CYR1YJL005W 6081 nt2.82□□□□□ -1.96
SFB2P53953 NUM1YDR150W 8247 nt2.82□□□□□ -1.96
SFB2P53953 snR60snR60 104 nt2.82□□□□□ -1.96
SFB2P53953 FMP16YDR070C 282 nt2.82□□□□□ -1.96
SFB2P53953 YMR172C-AYMR172C-A 384 nt2.82□□□□□ -1.96
SFB2P53953 YOR011W-AYOR011W-A 207 nt2.82□□□□□ -1.96
SFB2P53953 FIR1YER032W 2631 nt2.82□□□□□ -1.96
SFB2P53953 SCW11YGL028C 1629 nt2.82□□□□□ -1.96
SFB2P53953 NMD2YHR077C 3270 nt2.81□□□□□ -1.96
SFB2P53953 GPG1YGL121C 381 nt2.81□□□□□ -1.96
SFB2P53953 YAL042C-AYAL042C-A 378 nt2.81□□□□□ -1.96
SFB2P53953 TMN3YER113C 2121 nt2.8□□□□□ -1.96
SFB2P53953 YDR209CYDR209C 414 nt2.8□□□□□ -1.96
SFB2P53953 FPR1YNL135C 345 nt2.8□□□□□ -1.96
SFB2P53953 CRS5YOR031W 210 nt2.8□□□□□ -1.96
SFB2P53953 YBR224WYBR224W 516 nt2.8□□□□□ -1.96
SFB2P53953 GCV2YMR189W 3105 nt2.8□□□□□ -1.96
SFB2P53953 RGA2YDR379W 3030 nt2.8□□□□□ -1.96
SFB2P53953 DUG2YBR281C 2637 nt2.8□□□□□ -1.96
SFB2P53953 HRD3YLR207W 2502 nt2.8□□□□□ -1.96
SFB2P53953 PEX8YGR077C 1770 nt2.79□□□□□ -1.96
SFB2P53953 BFA1YJR053W 1725 nt2.79□□□□□ -1.96
SFB2P53953 PFD1YJL179W 330 nt2.79□□□□□ -1.96
SFB2P53953 RPS22AYJL190C 393 nt2.79□□□□□ -1.96
SFB2P53953 YLL032CYLL032C 2478 nt2.79□□□□□ -1.96
SFB2P53953 DRS2YAL026C 4068 nt2.78□□□□□ -1.96
SFB2P53953 MVP1YMR004W 1536 nt2.78□□□□□ -1.96
SFB2P53953 KAP123YER110C 3342 nt2.78□□□□□ -1.96
SFB2P53953 SSN2YDR443C 4263 nt2.78□□□□□ -1.96
SFB2P53953 VPH1YOR270C 2523 nt2.78□□□□□ -1.96
SFB2P53953 PDR3YBL005W 2931 nt2.78□□□□□ -1.96
SFB2P53953 YDR426CYDR426C 378 nt2.78□□□□□ -1.96
SFB2P53953 YGL052WYGL052W 306 nt2.78□□□□□ -1.96
SFB2P53953 TRX1YLR043C 312 nt2.78□□□□□ -1.96
SFB2P53953 YBL008W-AYBL008W-A 240 nt2.78□□□□□ -1.96
SFB2P53953 YNL028WYNL028W 318 nt2.78□□□□□ -1.96
SFB2P53953 NUT2YPR168W 474 nt2.78□□□□□ -1.96
SFB2P53953 YDR186CYDR186C 2634 nt2.78□□□□□ -1.96
SFB2P53953 SGS1YMR190C 4344 nt2.78□□□□□ -1.96
SFB2P53953 EFR3YMR212C 2349 nt2.77□□□□□ -1.97
SFB2P53953 NEW1YPL226W 3591 nt2.77□□□□□ -1.97
SFB2P53953 NPR2YEL062W 1848 nt2.77□□□□□ -1.97
SFB2P53953 YDL185C-AYDL185C-A 228 nt2.77□□□□□ -1.97
SFB2P53953 SMD1YGR074W 441 nt2.77□□□□□ -1.97
SFB2P53953 YOR333CYOR333C 417 nt2.77□□□□□ -1.97
SFB2P53953 RPL33AYPL143W 324 nt2.77□□□□□ -1.97
SFB2P53953 SMY1YKL079W 1971 nt2.77□□□□□ -1.97
SFB2P53953 FKS3YMR306W 5358 nt2.77□□□□□ -1.97
SFB2P53953 MRD1YPR112C 2664 nt2.76□□□□□ -1.97
SFB2P53953 ISW1YBR245C 3390 nt2.76□□□□□ -1.97
SFB2P53953 PAU2YEL049W 363 nt2.76□□□□□ -1.97
SFB2P53953 KTI11YBL071W-A 249 nt2.76□□□□□ -1.97
SFB2P53953 SDC25YLL016W 3147 nt2.75□□□□□ -1.97
SFB2P53953 YBR184WYBR184W 1572 nt2.75□□□□□ -1.97
SFB2P53953 SNF5YBR289W 2718 nt2.75□□□□□ -1.97
SFB2P53953 LCD1YDR499W 2244 nt2.75□□□□□ -1.97
SFB2P53953 YLR255CYLR255C 354 nt2.75□□□□□ -1.97
SFB2P53953 RIC1YLR039C 3171 nt2.75□□□□□ -1.97
SFB2P53953 YPL216WYPL216W 3309 nt2.74□□□□□ -1.97
SFB2P53953 YMR141W-AYMR141W-A 225 nt2.74□□□□□ -1.97
SFB2P53953 CSE2YNR010W 450 nt2.74□□□□□ -1.97
SFB2P53953 SEF1YBL066C 3447 nt2.74□□□□□ -1.97
SFB2P53953 TRS130YMR218C 3309 nt2.73□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 44.8 ms