Protein–RNA interactions for Protein: P53840

TOF1, Topoisomerase 1-associated factor 1, yeastyeast

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOF1P53840 USO1YDL058W 5373 nt2.1□□□□□ -2.07
TOF1P53840 MNE1YOR350C 1992 nt2.09□□□□□ -2.07
TOF1P53840 YDL025W-AYDL025W-A 105 nt2.09□□□□□ -2.07
TOF1P53840 YLR287CYLR287C 1068 nt2.09□□□□□ -2.07
TOF1P53840 VPS52YDR484W 1926 nt2.09□□□□□ -2.08
TOF1P53840 NAN1YPL126W 2691 nt2.08□□□□□ -2.08
TOF1P53840 YSW1YBR148W 1830 nt2.08□□□□□ -2.08
TOF1P53840 RTR1YER139C 681 nt2.08□□□□□ -2.08
TOF1P53840 HIT1YJR055W 495 nt2.08□□□□□ -2.08
TOF1P53840 YKR075W-AYKR075W-A 270 nt2.08□□□□□ -2.08
TOF1P53840 MRPL50YNR022C 420 nt2.08□□□□□ -2.08
TOF1P53840 MMS22YLR320W 4365 nt2.07□□□□□ -2.08
TOF1P53840 HER1YOR227W 3741 nt2.07□□□□□ -2.08
TOF1P53840 ELG1YOR144C 2376 nt2.07□□□□□ -2.08
TOF1P53840 YMR045CYMR045C 5268 nt2.07□□□□□ -2.08
TOF1P53840 YDL041WYDL041W 354 nt2.07□□□□□ -2.08
TOF1P53840 YNL058CYNL058C 951 nt2.07□□□□□ -2.08
TOF1P53840 LSM7YNL147W 348 nt2.07□□□□□ -2.08
TOF1P53840 DIE2YGR227W 1578 nt2.06□□□□□ -2.08
TOF1P53840 COX1Q0045 1605 nt2.06□□□□□ -2.08
TOF1P53840 YER076W-AYER076W-A 348 nt2.06□□□□□ -2.08
TOF1P53840 LCL2YLR104W 396 nt2.06□□□□□ -2.08
TOF1P53840 YLR255CYLR255C 354 nt2.06□□□□□ -2.08
TOF1P53840 CAT2YML042W 2013 nt2.05□□□□□ -2.08
TOF1P53840 NOP10YHR072W-A 177 nt2.05□□□□□ -2.08
TOF1P53840 GRR1YJR090C 3456 nt2.05□□□□□ -2.08
TOF1P53840 MPH1YIR002C 2982 nt2.04□□□□□ -2.08
TOF1P53840 ATG9YDL149W 2994 nt2.04□□□□□ -2.08
TOF1P53840 YER137W-AYER137W-A 306 nt2.04□□□□□ -2.08
TOF1P53840 URM1YIL008W 300 nt2.04□□□□□ -2.08
TOF1P53840 YMR272W-BYMR272W-B 108 nt2.04□□□□□ -2.08
TOF1P53840 IRC10YOL015W 1761 nt2.04□□□□□ -2.08
TOF1P53840 BUD2YKL092C 3315 nt2.04□□□□□ -2.08
TOF1P53840 PDR8YLR266C 2106 nt2.03□□□□□ -2.08
TOF1P53840 CRM1YGR218W 3255 nt2.03□□□□□ -2.08
TOF1P53840 GNT1YOR320C 1476 nt2.03□□□□□ -2.08
TOF1P53840 snR79snR79 84 nt2.03□□□□□ -2.08
TOF1P53840 YMR324CYMR324C 243 nt2.03□□□□□ -2.08
TOF1P53840 YNL010WYNL010W 726 nt2.03□□□□□ -2.08
TOF1P53840 YOR146WYOR146W 306 nt2.03□□□□□ -2.08
TOF1P53840 ROX1YPR065W 1107 nt2.03□□□□□ -2.08
TOF1P53840 SOK2YMR016C 2358 nt2.03□□□□□ -2.08
TOF1P53840 BFA1YJR053W 1725 nt2.03□□□□□ -2.09
TOF1P53840 MGA2YIR033W 3342 nt2.02□□□□□ -2.09
TOF1P53840 YLR053CYLR053C 327 nt2.02□□□□□ -2.09
TOF1P53840 YPR197CYPR197C 564 nt2.02□□□□□ -2.09
TOF1P53840 YDR341CYDR341C 1824 nt2.02□□□□□ -2.09
TOF1P53840 PET309YLR067C 2898 nt2.02□□□□□ -2.09
TOF1P53840 CDC24YAL041W 2565 nt2.02□□□□□ -2.09
TOF1P53840 MZM1YDR493W 372 nt2.01□□□□□ -2.09
TOF1P53840 RPL37BYDR500C 267 nt2.01□□□□□ -2.09
TOF1P53840 YER023C-AYER023C-A 213 nt2.01□□□□□ -2.09
TOF1P53840 YBL071CYBL071C 309 nt2.01□□□□□ -2.09
TOF1P53840 YOR121CYOR121C 306 nt2.01□□□□□ -2.09
TOF1P53840 FAB1YFR019W 6837 nt2.01□□□□□ -2.09
TOF1P53840 MSS11YMR164C 2277 nt2.01□□□□□ -2.09
TOF1P53840 SYH1YPL105C 2550 nt2.01□□□□□ -2.09
TOF1P53840 NAM7YMR080C 2916 nt2.01□□□□□ -2.09
TOF1P53840 PEX8YGR077C 1770 nt2□□□□□ -2.09
TOF1P53840 SWT1YOR166C 1377 nt2□□□□□ -2.09
TOF1P53840 YDR286CYDR286C 345 nt2□□□□□ -2.09
TOF1P53840 SMD1YGR074W 441 nt2□□□□□ -2.09
TOF1P53840 RTT102YGR275W 474 nt2□□□□□ -2.09
TOF1P53840 YHR071C-AYHR071C-A 321 nt2□□□□□ -2.09
TOF1P53840 TMA22YJR014W 597 nt2□□□□□ -2.09
TOF1P53840 YPL238CYPL238C 390 nt2□□□□□ -2.09
TOF1P53840 HOP2YGL033W 657 nt1.99□□□□□ -2.09
TOF1P53840 LSO2YGR169C-A 279 nt1.99□□□□□ -2.09
TOF1P53840 RPS20YHL015W 366 nt1.99□□□□□ -2.09
TOF1P53840 GRX8YLR364W 330 nt1.99□□□□□ -2.09
TOF1P53840 RPS18BYML026C 441 nt1.99□□□□□ -2.09
TOF1P53840 YOL159C-AYOL159C-A 273 nt1.99□□□□□ -2.09
TOF1P53840 NUP120YKL057C 3114 nt1.99□□□□□ -2.09
TOF1P53840 GCN2YDR283C 4980 nt1.98□□□□□ -2.09
TOF1P53840 YER121WYER121W 345 nt1.98□□□□□ -2.09
TOF1P53840 TMA7YLR262C-A 195 nt1.98□□□□□ -2.09
TOF1P53840 YPR146CYPR146C 330 nt1.98□□□□□ -2.09
TOF1P53840 HCS1YKL017C 2052 nt1.98□□□□□ -2.09
TOF1P53840 YGR035CYGR035C 351 nt1.97□□□□□ -2.09
TOF1P53840 YML003WYML003W 873 nt1.97□□□□□ -2.09
TOF1P53840 YML009C-AYML009C-A 327 nt1.97□□□□□ -2.09
TOF1P53840 RTC6YPL183W-A 282 nt1.97□□□□□ -2.09
TOF1P53840 YJR098CYJR098C 1971 nt1.96□□□□□ -2.1
TOF1P53840 VPS34YLR240W 2628 nt1.96□□□□□ -2.1
TOF1P53840 STB4YMR019W 2850 nt1.96□□□□□ -2.1
TOF1P53840 YCR087C-AYCR087C-A 462 nt1.96□□□□□ -2.1
TOF1P53840 YHR214C-BYHR214C-B 5382 nt1.96□□□□□ -2.1
TOF1P53840 KAR3YPR141C 2190 nt1.96□□□□□ -2.1
TOF1P53840 CFT2YLR115W 2580 nt1.96□□□□□ -2.1
TOF1P53840 RIC1YLR039C 3171 nt1.95□□□□□ -2.1
TOF1P53840 DIS3YOL021C 3006 nt1.95□□□□□ -2.1
TOF1P53840 RPA34YJL148W 702 nt1.95□□□□□ -2.1
TOF1P53840 FCF2YLR051C 654 nt1.95□□□□□ -2.1
TOF1P53840 IRC20YLR247C 4671 nt1.95□□□□□ -2.1
TOF1P53840 RPH1YER169W 2391 nt1.95□□□□□ -2.1
TOF1P53840 SPO22YIL073C 2928 nt1.95□□□□□ -2.1
TOF1P53840 YAL063C-AYAL063C-A 291 nt1.94□□□□□ -2.1
TOF1P53840 CHC1YGL206C 4962 nt1.94□□□□□ -2.1
TOF1P53840 YDL062WYDL062W 426 nt1.93□□□□□ -2.1
TOF1P53840 YJR011CYJR011C 786 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms