Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.32■□□□□ 0.84
NUBP1P53384 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUBP1P53384 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC20.32■□□□□ 0.84
NUBP1P53384 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
NUBP1P53384 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUBP1P53384 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.32■□□□□ 0.84
NUBP1P53384 ABCB10P4-201ENST00000566803 2184 ntBASIC20.32■□□□□ 0.84
NUBP1P53384 AC139530.1-201ENST00000575312 1977 ntBASIC20.32■□□□□ 0.84
NUBP1P53384 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
NUBP1P53384 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.31■□□□□ 0.84
NUBP1P53384 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.31■□□□□ 0.84
NUBP1P53384 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.31■□□□□ 0.84
NUBP1P53384 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.31■□□□□ 0.84
NUBP1P53384 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.31■□□□□ 0.84
NUBP1P53384 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC20.31■□□□□ 0.84
NUBP1P53384 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.31■□□□□ 0.84
NUBP1P53384 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.31■□□□□ 0.84
NUBP1P53384 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.31■□□□□ 0.84
NUBP1P53384 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.31■□□□□ 0.84
NUBP1P53384 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.31■□□□□ 0.84
NUBP1P53384 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.31■□□□□ 0.84
NUBP1P53384 OR13I1P-201ENST00000609811 1264 ntBASIC20.31■□□□□ 0.84
NUBP1P53384 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUBP1P53384 AL031985.4-201ENST00000642138 673 ntBASIC20.31■□□□□ 0.84
NUBP1P53384 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NUBP1P53384 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NUBP1P53384 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
NUBP1P53384 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NUBP1P53384 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NUBP1P53384 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.3■□□□□ 0.84
NUBP1P53384 AC117947.1-201ENST00000427448 529 ntBASIC20.3■□□□□ 0.84
NUBP1P53384 ECEL1P2-202ENST00000465689 757 ntBASIC20.3■□□□□ 0.84
NUBP1P53384 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.3■□□□□ 0.84
NUBP1P53384 AC026271.3-201ENST00000571884 352 ntBASIC20.3■□□□□ 0.84
NUBP1P53384 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.3■□□□□ 0.84
NUBP1P53384 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NUBP1P53384 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NUBP1P53384 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.29■□□□□ 0.84
NUBP1P53384 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NUBP1P53384 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NUBP1P53384 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NUBP1P53384 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.29■□□□□ 0.84
NUBP1P53384 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.29■□□□□ 0.84
NUBP1P53384 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NUBP1P53384 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
NUBP1P53384 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.28■□□□□ 0.84
NUBP1P53384 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 HMGA1P5-201ENST00000412453 271 ntBASIC20.28■□□□□ 0.84
NUBP1P53384 PCED1CP-201ENST00000419887 785 ntBASIC20.28■□□□□ 0.84
NUBP1P53384 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.28■□□□□ 0.84
NUBP1P53384 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.28■□□□□ 0.84
NUBP1P53384 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.28■□□□□ 0.84
NUBP1P53384 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.28■□□□□ 0.84
NUBP1P53384 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.28■□□□□ 0.84
NUBP1P53384 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.28■□□□□ 0.84
NUBP1P53384 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUBP1P53384 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
NUBP1P53384 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms