Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMSP52788 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMSP52788 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMSP52788 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
SMSP52788 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SMSP52788 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.92■□□□□ 0.62
SMSP52788 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.92■□□□□ 0.62
SMSP52788 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 AC069236.1-201ENST00000604339 616 ntBASIC18.92■□□□□ 0.62
SMSP52788 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.92■□□□□ 0.62
SMSP52788 AC120498.10-201ENST00000621827 505 ntBASIC18.92■□□□□ 0.62
SMSP52788 OR10C1-204ENST00000622521 1039 ntBASIC18.92■□□□□ 0.62
SMSP52788 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SMSP52788 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMSP52788 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SMSP52788 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMSP52788 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMSP52788 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.91■□□□□ 0.62
SMSP52788 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMSP52788 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMSP52788 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMSP52788 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
SMSP52788 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.91■□□□□ 0.62
SMSP52788 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.91■□□□□ 0.62
SMSP52788 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMSP52788 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.91■□□□□ 0.62
SMSP52788 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.91■□□□□ 0.62
SMSP52788 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMSP52788 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SMSP52788 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMSP52788 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.91■□□□□ 0.62
SMSP52788 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMSP52788 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMSP52788 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.9■□□□□ 0.62
SMSP52788 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.9■□□□□ 0.62
SMSP52788 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SMSP52788 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.9■□□□□ 0.62
SMSP52788 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.9■□□□□ 0.62
SMSP52788 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.9■□□□□ 0.62
SMSP52788 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.9■□□□□ 0.62
SMSP52788 MIPEPP3-201ENST00000412105 444 ntBASIC18.9■□□□□ 0.62
SMSP52788 CYP2T1P-201ENST00000432607 1285 ntBASIC18.9■□□□□ 0.62
SMSP52788 AC007322.4-201ENST00000509611 723 ntBASIC18.9■□□□□ 0.62
SMSP52788 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.9■□□□□ 0.62
SMSP52788 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.9■□□□□ 0.62
SMSP52788 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.9■□□□□ 0.62
SMSP52788 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SMSP52788 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.9■□□□□ 0.62
SMSP52788 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.9■□□□□ 0.62
SMSP52788 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMSP52788 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.89■□□□□ 0.62
SMSP52788 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SMSP52788 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SMSP52788 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMSP52788 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SMSP52788 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMSP52788 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SMSP52788 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMSP52788 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.89■□□□□ 0.61
SMSP52788 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.89■□□□□ 0.61
SMSP52788 AC007225.1-201ENST00000566331 1836 ntBASIC18.89■□□□□ 0.61
SMSP52788 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.89■□□□□ 0.61
SMSP52788 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMSP52788 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.89■□□□□ 0.61
SMSP52788 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.89■□□□□ 0.61
SMSP52788 AC098934.4-201ENST00000564127 592 ntBASIC18.89■□□□□ 0.61
SMSP52788 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 AC008687.6-201ENST00000596318 630 ntBASIC18.89■□□□□ 0.61
SMSP52788 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.89■□□□□ 0.61
SMSP52788 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SMSP52788 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMSP52788 AC068338.2-201ENST00000563278 1430 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms