Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1P51610 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC1P51610 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1P51610 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
HCFC1P51610 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.77■□□□□ 0.43
HCFC1P51610 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.77■□□□□ 0.43
HCFC1P51610 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.77■□□□□ 0.43
HCFC1P51610 AL445228.2-201ENST00000605589 952 ntBASIC17.77■□□□□ 0.43
HCFC1P51610 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1P51610 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1P51610 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1P51610 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1P51610 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1P51610 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1P51610 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.76■□□□□ 0.43
HCFC1P51610 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 AC006557.6-201ENST00000623071 864 ntBASIC17.76■□□□□ 0.43
HCFC1P51610 AC097493.4-201ENST00000641197 219 ntBASIC17.76■□□□□ 0.43
HCFC1P51610 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC1P51610 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC1P51610 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1P51610 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1P51610 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
HCFC1P51610 AC007375.3-201ENST00000600936 2314 ntBASIC17.75■□□□□ 0.43
HCFC1P51610 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HCFC1P51610 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC1P51610 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC1P51610 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HCFC1P51610 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.75■□□□□ 0.43
HCFC1P51610 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HCFC1P51610 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC1P51610 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC1P51610 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HCFC1P51610 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1P51610 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.74■□□□□ 0.43
HCFC1P51610 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.74■□□□□ 0.43
HCFC1P51610 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.74■□□□□ 0.43
HCFC1P51610 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HCFC1P51610 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HCFC1P51610 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HCFC1P51610 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.74■□□□□ 0.43
HCFC1P51610 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 AL390719.1-204ENST00000412397 1219 ntBASIC17.74■□□□□ 0.43
HCFC1P51610 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.74■□□□□ 0.43
HCFC1P51610 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.74■□□□□ 0.43
HCFC1P51610 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.74■□□□□ 0.43
HCFC1P51610 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HCFC1P51610 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.73■□□□□ 0.43
HCFC1P51610 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HCFC1P51610 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HCFC1P51610 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.73■□□□□ 0.43
HCFC1P51610 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.73■□□□□ 0.43
HCFC1P51610 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
HCFC1P51610 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HCFC1P51610 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HCFC1P51610 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC1P51610 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms