Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB5CP51148 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5CP51148 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB5CP51148 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB5CP51148 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
RAB5CP51148 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 Z82202.1-201ENST00000623446 1880 ntBASIC16.29■□□□□ 0.2
RAB5CP51148 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB5CP51148 AC093484.2-201ENST00000580996 2166 ntBASIC16.28■□□□□ 0.2
RAB5CP51148 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RAB5CP51148 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB5CP51148 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB5CP51148 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB5CP51148 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 TMEM179-206ENST00000616017 1645 ntBASIC16.28■□□□□ 0.2
RAB5CP51148 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 AC010141.3-201ENST00000456659 717 ntBASIC16.28■□□□□ 0.2
RAB5CP51148 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB5CP51148 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5CP51148 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB5CP51148 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB5CP51148 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB5CP51148 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5CP51148 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB5CP51148 Z92544.1-202ENST00000571933 1220 ntBASIC16.27■□□□□ 0.2
RAB5CP51148 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB5CP51148 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB5CP51148 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.27■□□□□ 0.19
RAB5CP51148 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RAB5CP51148 AC011484.1-201ENST00000377652 1995 ntBASIC16.27■□□□□ 0.19
RAB5CP51148 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB5CP51148 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.27■□□□□ 0.19
RAB5CP51148 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5CP51148 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB5CP51148 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAB5CP51148 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB5CP51148 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB5CP51148 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
RAB5CP51148 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 AL138781.2-201ENST00000617896 1843 ntBASIC16.26■□□□□ 0.19
RAB5CP51148 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5CP51148 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB5CP51148 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5CP51148 AP006587.3-201ENST00000525742 1516 ntBASIC16.25■□□□□ 0.19
RAB5CP51148 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.25■□□□□ 0.19
RAB5CP51148 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5CP51148 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5CP51148 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB5CP51148 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB5CP51148 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB5CP51148 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5CP51148 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms