Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN7P35236 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTPN7P35236 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTPN7P35236 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTPN7P35236 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 CYP21A1P-202ENST00000354927 1481 ntBASIC20.97■□□□□ 0.95
PTPN7P35236 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 KRT18P11-201ENST00000435214 1283 ntBASIC20.97■□□□□ 0.95
PTPN7P35236 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN7P35236 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN7P35236 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN7P35236 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 BX119927.1-201ENST00000636596 1552 ntBASIC20.97■□□□□ 0.95
PTPN7P35236 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN7P35236 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN7P35236 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN7P35236 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN7P35236 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPN7P35236 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN7P35236 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN7P35236 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN7P35236 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN7P35236 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PTPN7P35236 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PTPN7P35236 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPN7P35236 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PTPN7P35236 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN7P35236 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN7P35236 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPN7P35236 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN7P35236 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
PTPN7P35236 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN7P35236 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN7P35236 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PTPN7P35236 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN7P35236 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN7P35236 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
PTPN7P35236 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN7P35236 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.95■□□□□ 0.94
PTPN7P35236 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN7P35236 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PTPN7P35236 AC013268.1-206ENST00000638368 961 ntBASIC20.95■□□□□ 0.94
PTPN7P35236 AC112229.1-201ENST00000639295 961 ntBASIC20.95■□□□□ 0.94
PTPN7P35236 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN7P35236 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
PTPN7P35236 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN7P35236 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN7P35236 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN7P35236 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN7P35236 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN7P35236 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN7P35236 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN7P35236 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.94■□□□□ 0.94
PTPN7P35236 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN7P35236 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN7P35236 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN7P35236 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN7P35236 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PTPN7P35236 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTPN7P35236 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN7P35236 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN7P35236 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN7P35236 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN7P35236 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PTPN7P35236 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN7P35236 PCDHAC2-203ENST00000615316 3011 ntBASIC20.93■□□□□ 0.94
PTPN7P35236 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPN7P35236 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN7P35236 AC087623.3-201ENST00000607047 1098 ntBASIC20.93■□□□□ 0.94
PTPN7P35236 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN7P35236 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN7P35236 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN7P35236 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN7P35236 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms