Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.9□□□□□ -0.02
CKS2P33552 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CKS2P33552 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.9□□□□□ -0.02
CKS2P33552 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.89□□□□□ -0.03
CKS2P33552 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CKS2P33552 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CKS2P33552 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CKS2P33552 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 AC011484.1-201ENST00000377652 1995 ntBASIC14.89□□□□□ -0.03
CKS2P33552 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CKS2P33552 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CKS2P33552 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.88□□□□□ -0.03
CKS2P33552 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CKS2P33552 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CKS2P33552 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CKS2P33552 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CKS2P33552 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
CKS2P33552 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.88□□□□□ -0.03
CKS2P33552 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.88□□□□□ -0.03
CKS2P33552 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CKS2P33552 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CKS2P33552 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.87□□□□□ -0.03
CKS2P33552 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CKS2P33552 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.87□□□□□ -0.03
CKS2P33552 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.87□□□□□ -0.03
CKS2P33552 MIR3181-201ENST00000578512 73 ntBASIC14.87□□□□□ -0.03
CKS2P33552 AC099791.2-201ENST00000605725 427 ntBASIC14.87□□□□□ -0.03
CKS2P33552 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CKS2P33552 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.87□□□□□ -0.03
CKS2P33552 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CKS2P33552 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CKS2P33552 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms