Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.43■□□□□ 0.7
PTX3P26022 AL356652.1-201ENST00000615962 565 ntBASIC19.43■□□□□ 0.7
PTX3P26022 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX3P26022 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.43■□□□□ 0.7
PTX3P26022 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTX3P26022 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTX3P26022 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX3P26022 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTX3P26022 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX3P26022 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTX3P26022 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 AL162377.1-201ENST00000618844 1793 ntBASIC19.42■□□□□ 0.7
PTX3P26022 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTX3P26022 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
PTX3P26022 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 MCRIP2P1-201ENST00000394346 511 ntBASIC19.42■□□□□ 0.7
PTX3P26022 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.42■□□□□ 0.7
PTX3P26022 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.42■□□□□ 0.7
PTX3P26022 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 AC092437.1-201ENST00000624794 1048 ntBASIC19.42■□□□□ 0.7
PTX3P26022 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTX3P26022 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTX3P26022 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.42■□□□□ 0.7
PTX3P26022 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.42■□□□□ 0.7
PTX3P26022 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.41■□□□□ 0.7
PTX3P26022 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.41■□□□□ 0.7
PTX3P26022 AL137784.2-201ENST00000607332 1000 ntBASIC19.41■□□□□ 0.7
PTX3P26022 AC080038.1-201ENST00000611274 1154 ntBASIC19.41■□□□□ 0.7
PTX3P26022 IKBKGP1-201ENST00000612193 1073 ntBASIC19.41■□□□□ 0.7
PTX3P26022 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 OR10C1-204ENST00000622521 1039 ntBASIC19.41■□□□□ 0.7
PTX3P26022 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTX3P26022 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.41■□□□□ 0.7
PTX3P26022 AL512408.1-201ENST00000569378 2000 ntBASIC19.41■□□□□ 0.7
PTX3P26022 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PTX3P26022 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTX3P26022 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.4■□□□□ 0.7
PTX3P26022 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.4■□□□□ 0.7
PTX3P26022 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTX3P26022 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PTX3P26022 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTX3P26022 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTX3P26022 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PTX3P26022 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PTX3P26022 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.39■□□□□ 0.7
PTX3P26022 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTX3P26022 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
PTX3P26022 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTX3P26022 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTX3P26022 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX3P26022 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX3P26022 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX3P26022 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PTX3P26022 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX3P26022 AC004911.1-201ENST00000416316 871 ntBASIC19.39■□□□□ 0.69
PTX3P26022 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.39■□□□□ 0.69
PTX3P26022 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms