Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YLR307C-AYLR307C-A 264 nt0.69□□□□□ -2.3
CDC39P25655 YNL179CYNL179C 438 nt0.69□□□□□ -2.3
CDC39P25655 snR14snR14 160 nt0.69□□□□□ -2.3
CDC39P25655 HIR3YJR140C 4947 nt0.69□□□□□ -2.3
CDC39P25655 SVP26YHR181W 687 nt0.68□□□□□ -2.3
CDC39P25655 ARV1YLR242C 966 nt0.68□□□□□ -2.3
CDC39P25655 CGI121YML036W 546 nt0.68□□□□□ -2.3
CDC39P25655 SPR3YGR059W 1539 nt0.68□□□□□ -2.3
CDC39P25655 YCR016WYCR016W 873 nt0.68□□□□□ -2.3
CDC39P25655 UFE1YOR075W 1041 nt0.68□□□□□ -2.3
CDC39P25655 YMR160WYMR160W 2451 nt0.68□□□□□ -2.3
CDC39P25655 MSC6YOR354C 2079 nt0.67□□□□□ -2.3
CDC39P25655 YJR029WYJR029W 5268 nt0.67□□□□□ -2.3
CDC39P25655 YPR137C-BYPR137C-B 5268 nt0.67□□□□□ -2.3
CDC39P25655 RAD6YGL058W 519 nt0.67□□□□□ -2.3
CDC39P25655 YPL119C-AYPL119C-A 264 nt0.67□□□□□ -2.3
CDC39P25655 DGR2YKL121W 2559 nt0.67□□□□□ -2.3
CDC39P25655 MSS11YMR164C 2277 nt0.67□□□□□ -2.3
CDC39P25655 YGR109W-BYGR109W-B 4644 nt0.67□□□□□ -2.3
CDC39P25655 snR59snR59 78 nt0.67□□□□□ -2.3
CDC39P25655 RMD6YEL072W 696 nt0.67□□□□□ -2.3
CDC39P25655 YLL020CYLL020C 306 nt0.67□□□□□ -2.3
CDC39P25655 YOR376WYOR376W 369 nt0.67□□□□□ -2.3
CDC39P25655 YCL046WYCL046W 324 nt0.67□□□□□ -2.3
CDC39P25655 UTP20YBL004W 7482 nt0.66□□□□□ -2.3
CDC39P25655 YDR199WYDR199W 366 nt0.66□□□□□ -2.3
CDC39P25655 LIN1YHR156C 1023 nt0.66□□□□□ -2.3
CDC39P25655 ABM1YJR108W 372 nt0.66□□□□□ -2.3
CDC39P25655 DPB11YJL090C 2295 nt0.66□□□□□ -2.3
CDC39P25655 QCR9YGR183C 201 nt0.65□□□□□ -2.3
CDC39P25655 SRB7YDR308C 423 nt0.65□□□□□ -2.31
CDC39P25655 WIP1YDR374W-A 270 nt0.65□□□□□ -2.31
CDC39P25655 YDR521WYDR521W 336 nt0.65□□□□□ -2.31
CDC39P25655 LOC1YFR001W 615 nt0.65□□□□□ -2.31
CDC39P25655 MTG1YMR097C 1104 nt0.65□□□□□ -2.31
CDC39P25655 SMC1YFL008W 3678 nt0.65□□□□□ -2.31
CDC39P25655 RPL29YFR032C-A 180 nt0.64□□□□□ -2.31
CDC39P25655 URM1YIL008W 300 nt0.64□□□□□ -2.31
CDC39P25655 CTK3YML112W 891 nt0.64□□□□□ -2.31
CDC39P25655 CMC4YMR194C-B 222 nt0.64□□□□□ -2.31
CDC39P25655 MZM1YDR493W 372 nt0.64□□□□□ -2.31
CDC39P25655 COX3Q0275 810 nt0.64□□□□□ -2.31
CDC39P25655 POL32YJR043C 1053 nt0.64□□□□□ -2.31
CDC39P25655 SEC1YDR164C 2175 nt0.63□□□□□ -2.31
CDC39P25655 YDR194W-AYDR194W-A 153 nt0.63□□□□□ -2.31
CDC39P25655 RSM28YDR494W 1086 nt0.63□□□□□ -2.31
CDC39P25655 RPL22BYFL034C-A 369 nt0.63□□□□□ -2.31
CDC39P25655 CRG1YHR209W 876 nt0.63□□□□□ -2.31
CDC39P25655 SMD3YLR147C 306 nt0.63□□□□□ -2.31
CDC39P25655 YOL014WYOL014W 375 nt0.63□□□□□ -2.31
CDC39P25655 MPT5YGL178W 2580 nt0.63□□□□□ -2.31
CDC39P25655 GEA2YEL022W 4380 nt0.63□□□□□ -2.31
CDC39P25655 YDR114CYDR114C 303 nt0.62□□□□□ -2.31
CDC39P25655 PRM8YGL053W 714 nt0.62□□□□□ -2.31
CDC39P25655 FCF2YLR051C 654 nt0.62□□□□□ -2.31
CDC39P25655 BRX1YOL077C 876 nt0.62□□□□□ -2.31
CDC39P25655 RRI2YOL117W 1938 nt0.62□□□□□ -2.31
CDC39P25655 NOC3YLR002C 1992 nt0.62□□□□□ -2.31
CDC39P25655 YDL073WYDL073W 2955 nt0.62□□□□□ -2.31
CDC39P25655 SAS3YBL052C 2496 nt0.62□□□□□ -2.31
CDC39P25655 YKL183C-AYKL183C-A 213 nt0.62□□□□□ -2.31
CDC39P25655 YBR200W-AYBR200W-A 165 nt0.62□□□□□ -2.31
CDC39P25655 RUB1YDR139C 234 nt0.61□□□□□ -2.31
CDC39P25655 RSM23YGL129C 1353 nt0.61□□□□□ -2.31
CDC39P25655 RIM20YOR275C 1986 nt0.61□□□□□ -2.31
CDC39P25655 RTC6YPL183W-A 282 nt0.61□□□□□ -2.31
CDC39P25655 ZIP1YDR285W 2628 nt0.61□□□□□ -2.31
CDC39P25655 SLU7YDR088C 1149 nt0.61□□□□□ -2.31
CDC39P25655 CUP1-1YHR053C 186 nt0.61□□□□□ -2.31
CDC39P25655 CUP1-2YHR055C 186 nt0.61□□□□□ -2.31
CDC39P25655 MSN5YDR335W 3675 nt0.61□□□□□ -2.31
CDC39P25655 APL3YBL037W 3078 nt0.6□□□□□ -2.31
CDC39P25655 COF1YLL050C 432 nt0.6□□□□□ -2.31
CDC39P25655 RPL37AYLR185W 267 nt0.6□□□□□ -2.31
CDC39P25655 YOR105WYOR105W 327 nt0.6□□□□□ -2.31
CDC39P25655 YGL204CYGL204C 306 nt0.59□□□□□ -2.31
CDC39P25655 YHL009W-AYHL009W-A 1242 nt0.59□□□□□ -2.31
CDC39P25655 RPL42BYHR141C 321 nt0.59□□□□□ -2.31
CDC39P25655 SEC22YLR268W 645 nt0.59□□□□□ -2.31
CDC39P25655 RPL9BYNL067W 576 nt0.59□□□□□ -2.31
CDC39P25655 RPL42AYNL162W 321 nt0.59□□□□□ -2.31
CDC39P25655 YOR152CYOR152C 771 nt0.59□□□□□ -2.31
CDC39P25655 YOR218CYOR218C 420 nt0.59□□□□□ -2.31
CDC39P25655 ADR1YDR216W 3972 nt0.59□□□□□ -2.31
CDC39P25655 AIM44YPL158C 2277 nt0.59□□□□□ -2.32
CDC39P25655 YGR045CYGR045C 363 nt0.59□□□□□ -2.32
CDC39P25655 YGR115CYGR115C 780 nt0.59□□□□□ -2.32
CDC39P25655 YBR032WYBR032W 303 nt0.59□□□□□ -2.32
CDC39P25655 UTP8YGR128C 2142 nt0.59□□□□□ -2.32
CDC39P25655 YIL030W-AYIL030W-A 339 nt0.58□□□□□ -2.32
CDC39P25655 YBL068W-AYBL068W-A 237 nt0.58□□□□□ -2.32
CDC39P25655 YOR169CYOR169C 465 nt0.58□□□□□ -2.32
CDC39P25655 YOR366WYOR366W 354 nt0.58□□□□□ -2.32
CDC39P25655 ULP2YIL031W 3105 nt0.58□□□□□ -2.32
CDC39P25655 TUS1YLR425W 3924 nt0.58□□□□□ -2.32
CDC39P25655 YER038W-AYER038W-A 381 nt0.58□□□□□ -2.32
CDC39P25655 DOP1YDR141C 5097 nt0.58□□□□□ -2.32
CDC39P25655 SWI6YLR182W 2412 nt0.57□□□□□ -2.32
CDC39P25655 YDR003W-AYDR003W-A 123 nt0.57□□□□□ -2.32
CDC39P25655 YKL145W-AYKL145W-A 93 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 38.8 ms