Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.99■□□□□ 0.79
LAMA1P25391 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMA1P25391 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
LAMA1P25391 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LAMA1P25391 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.99■□□□□ 0.79
LAMA1P25391 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 RBM17P1-201ENST00000453646 1190 ntBASIC19.99■□□□□ 0.79
LAMA1P25391 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMA1P25391 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LAMA1P25391 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LAMA1P25391 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 AC005521.1-201ENST00000393351 872 ntBASIC19.99■□□□□ 0.79
LAMA1P25391 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMA1P25391 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.99■□□□□ 0.79
LAMA1P25391 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LAMA1P25391 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.98■□□□□ 0.79
LAMA1P25391 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.98■□□□□ 0.79
LAMA1P25391 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.98■□□□□ 0.79
LAMA1P25391 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.98■□□□□ 0.79
LAMA1P25391 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.98■□□□□ 0.79
LAMA1P25391 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 UNC93B2-201ENST00000285383 730 ntBASIC19.98■□□□□ 0.79
LAMA1P25391 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.98■□□□□ 0.79
LAMA1P25391 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LAMA1P25391 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.98■□□□□ 0.79
LAMA1P25391 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LAMA1P25391 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LAMA1P25391 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.97■□□□□ 0.79
LAMA1P25391 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.97■□□□□ 0.79
LAMA1P25391 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 AC010947.1-201ENST00000623454 693 ntBASIC19.97■□□□□ 0.79
LAMA1P25391 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LAMA1P25391 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LAMA1P25391 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.97■□□□□ 0.79
LAMA1P25391 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
LAMA1P25391 EP400NL-214ENST00000641289 2402 ntBASIC19.96■□□□□ 0.79
LAMA1P25391 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 KRT16P5-201ENST00000455284 522 ntBASIC19.96■□□□□ 0.79
LAMA1P25391 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.96■□□□□ 0.79
LAMA1P25391 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.96■□□□□ 0.79
LAMA1P25391 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 NTF6B-201ENST00000591913 560 ntBASIC19.96■□□□□ 0.79
LAMA1P25391 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.96■□□□□ 0.79
LAMA1P25391 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.96■□□□□ 0.79
LAMA1P25391 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.96■□□□□ 0.79
LAMA1P25391 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.96■□□□□ 0.79
LAMA1P25391 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.96■□□□□ 0.79
LAMA1P25391 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.96■□□□□ 0.79
LAMA1P25391 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LAMA1P25391 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.95■□□□□ 0.78
LAMA1P25391 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.95■□□□□ 0.78
LAMA1P25391 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.95■□□□□ 0.78
LAMA1P25391 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.95■□□□□ 0.78
LAMA1P25391 AC110285.5-201ENST00000611501 352 ntBASIC19.95■□□□□ 0.78
LAMA1P25391 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
LAMA1P25391 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LAMA1P25391 FAM197Y1-201ENST00000421178 764 ntBASIC19.95■□□□□ 0.78
LAMA1P25391 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.95■□□□□ 0.78
LAMA1P25391 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.95■□□□□ 0.78
LAMA1P25391 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LAMA1P25391 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms